Detailed information NTG0354081

Bioinformatically predicted

Overview

• Name: comGD
• Type: Machinery gene
• Locus tag: GPA00_RS03645
• Genome accession: NZ_CP046629
• Coordinates: 708211..708651 (+)
• Length: 146 a.a.
• NCBI ID: WP_157327520.1
• Uniprot ID: -
• Organism: Streptococcus equinus strain CNU G6
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 703211..713651

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GPA00_RS03625 (GPA00_03625)	-	705589..705957 (+)	369	WP_094140982.1	DUF1033 family protein	-
GPA00_RS03630 (GPA00_03630)	comGA	706026..706967 (+)	942	WP_027968018.1	competence type IV pilus ATPase ComGA	Machinery gene
GPA00_RS03635 (GPA00_03635)	comGB	706891..707934 (+)	1044	WP_167697815.1	competence type IV pilus assembly protein ComGB	Machinery gene
GPA00_RS03640 (GPA00_03640)	comGC	707934..708236 (+)	303	WP_021141433.1	competence type IV pilus major pilin ComGC	Machinery gene
GPA00_RS03645 (GPA00_03645)	comGD	708211..708651 (+)	441	WP_157327520.1	competence type IV pilus minor pilin ComGD	Machinery gene
GPA00_RS03650 (GPA00_03650)	comGE	708605..708898 (+)	294	WP_074629067.1	competence type IV pilus minor pilin ComGE	Machinery gene
GPA00_RS03655 (GPA00_03655)	comGF	708882..709319 (+)	438	WP_157327522.1	competence type IV pilus minor pilin ComGF	Machinery gene
GPA00_RS03660 (GPA00_03660)	comGG	709348..709641 (+)	294	WP_268894141.1	competence type IV pilus minor pilin ComGG	Machinery gene
GPA00_RS03665 (GPA00_03665)	comGH	709695..710651 (+)	957	WP_024344497.1	class I SAM-dependent methyltransferase	Machinery gene
GPA00_RS03670 (GPA00_03670)	-	710705..711904 (+)	1200	WP_045798327.1	acetate kinase	-
GPA00_RS03675 (GPA00_03675)	-	712062..712259 (+)	198	WP_027968026.1	helix-turn-helix transcriptional regulator	-
GPA00_RS03680 (GPA00_03680)	-	712315..712767 (+)	453	WP_074483978.1	ABC transporter permease	-
GPA00_RS03685 (GPA00_03685)	-	712779..713414 (+)	636	WP_141348477.1	CPBP family intramembrane glutamic endopeptidase	-

Sequence

Protein

• Length: 146 a.a.
• Molecular weight: 16369.90 Da
• Isoelectric Point: 9.6144

>NTDB_id=354081 GPA00_RS03645 WP_157327520.1 708211..708651(+) (comGD) [Streptococcus equinus strain CNU G6]
MKKLNLKNKKIRAFTLLESLLTLGLSCFIVIMLSNSVSGIFQTVEEKLFFLSFEHCYRDTQKLASLKQENQVLTISQDGI
SNSVAHISLPETVSVVENYKIVFDNAGGNSSLAKVKFQTKNQAIDYQLYIGSGNYKKTETKSLHTP

Nucleotide

• Length: 441 bp

>NTDB_id=354081 GPA00_RS03645 WP_157327520.1 708211..708651(+) (comGD) [Streptococcus equinus strain CNU G6]
ATGAAAAAGCTAAACCTAAAGAATAAAAAAATCCGAGCCTTCACCCTTTTAGAAAGTTTATTAACACTGGGACTTTCTTG
TTTTATCGTTATCATGCTCTCAAACTCTGTGAGTGGTATTTTTCAGACGGTCGAAGAAAAGTTGTTCTTTTTATCGTTTG
AGCATTGCTATCGTGACACCCAAAAATTAGCAAGTCTTAAACAAGAAAATCAAGTTCTGACAATTTCACAAGACGGCATT
TCAAATAGTGTGGCTCATATAAGTTTGCCAGAGACGGTATCAGTCGTTGAAAATTACAAAATTGTTTTTGATAATGCTGG
GGGCAATTCATCTCTTGCAAAAGTAAAATTTCAGACGAAGAATCAGGCTATTGATTATCAATTATACATAGGAAGTGGTA
ATTATAAAAAGACAGAAACTAAAAGCTTACATACTCCTTGA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD	Streptococcus gordonii str. Challis substr. CH1	49.63	92.466	0.459
comGD	Streptococcus mutans UA140	50	90.411	0.452
comGD	Streptococcus mutans UA159	50	90.411	0.452
comGD/cglD	Streptococcus mitis NCTC 12261	45.775	97.26	0.445
comGD/cglD	Streptococcus pneumoniae Rx1	47.727	90.411	0.432
comGD/cglD	Streptococcus pneumoniae D39	47.727	90.411	0.432
comGD/cglD	Streptococcus pneumoniae R6	47.727	90.411	0.432
comGD/cglD	Streptococcus mitis SK321	46.97	90.411	0.425
comGD/cglD	Streptococcus pneumoniae TIGR4	46.97	90.411	0.425