Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | E4K02_RS12320 | Genome accession | NZ_CP038258 |
| Coordinates | 2507121..2507594 (-) | Length | 157 a.a. |
| NCBI ID | WP_001214064.1 | Uniprot ID | A0A0J8UYN3 |
| Organism | Acinetobacter baumannii strain 39741 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2502121..2512594
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4K02_RS12305 (E4K02_12305) | pilX | 2504750..2505568 (-) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| E4K02_RS12310 (E4K02_12310) | pilW | 2505565..2506566 (-) | 1002 | WP_000079193.1 | PilW family protein | Machinery gene |
| E4K02_RS12315 (E4K02_12315) | pilV | 2506567..2507127 (-) | 561 | WP_085916952.1 | type IV pilus modification protein PilV | Machinery gene |
| E4K02_RS12320 (E4K02_12320) | fimU | 2507121..2507594 (-) | 474 | WP_001214064.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| E4K02_RS12325 (E4K02_12325) | ispH | 2507764..2508714 (-) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| E4K02_RS12330 (E4K02_12330) | gmk | 2508837..2509466 (+) | 630 | WP_000015937.1 | guanylate kinase | - |
| E4K02_RS12335 (E4K02_12335) | rpoZ | 2509539..2509817 (+) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| E4K02_RS12340 (E4K02_12340) | - | 2509856..2509986 (+) | 131 | Protein_2391 | hypothetical protein | - |
| E4K02_RS12345 (E4K02_12345) | - | 2510026..2512131 (+) | 2106 | WP_001117590.1 | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | - |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16850.43 Da Isoelectric Point: 8.5355
>NTDB_id=352823 E4K02_RS12320 WP_001214064.1 2507121..2507594(-) (fimU) [Acinetobacter baumannii strain 39741]
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEENC
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEENC
Nucleotide
Download Length: 474 bp
>NTDB_id=352823 E4K02_RS12320 WP_001214064.1 2507121..2507594(-) (fimU) [Acinetobacter baumannii strain 39741]
ATGAGGGGAATTATTCCGCAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCACCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACTACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTGGTTTTTAAGGCCGAGGAGAATTGTTAA
ATGAGGGGAATTATTCCGCAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCACCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACTACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTGGTTTTTAAGGCCGAGGAGAATTGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
99.363 |
100 |
0.994 |