Detailed information NTG0351910

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: GNT55_RS29070
• Genome accession: NZ_CP046404
• Coordinates: 6193063..6195207 (-)
• Length: 714 a.a.
• NCBI ID: WP_003161249.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain SE5416
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 6188063..6200207

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GNT55_RS29055 (GNT55_29055)	-	6189721..6191370 (-)	1650	WP_023104793.1	AAA family ATPase	-
GNT55_RS29060 (GNT55_29060)	aroB	6191377..6192483 (-)	1107	WP_028681386.1	3-dehydroquinate synthase	-
GNT55_RS29065 (GNT55_29065)	aroK	6192533..6193051 (-)	519	WP_003095833.1	shikimate kinase AroK	-
GNT55_RS29070 (GNT55_29070)	pilQ	6193063..6195207 (-)	2145	WP_003161249.1	type 4a pilus secretin PilQ	Machinery gene
GNT55_RS29075 (GNT55_29075)	-	6195261..6195368 (-)	108	Protein_5775	pilus assembly protein PilP	-
GNT55_RS29080 (GNT55_29080)	-	6195492..6195851 (-)	360	WP_003094179.1	Mor transcription activator family protein	-
GNT55_RS29085 (GNT55_29085)	-	6195854..6196417 (-)	564	WP_023657063.1	gp16 family protein	-
GNT55_RS29090 (GNT55_29090)	-	6196404..6196871 (-)	468	WP_179063022.1	hypothetical protein	-
GNT55_RS29095 (GNT55_29095)	-	6196873..6197091 (-)	219	WP_003148480.1	hypothetical protein	-
GNT55_RS29100 (GNT55_29100)	-	6197093..6197782 (-)	690	WP_003094188.1	DUF2786 domain-containing protein	-
GNT55_RS29105 (GNT55_29105)	-	6197784..6198407 (-)	624	WP_003094190.1	DUF3164 family protein	-
GNT55_RS29110 (GNT55_29110)	-	6198400..6198600 (-)	201	WP_003148482.1	hypothetical protein	-
GNT55_RS32670	-	6198593..6199204 (-)	612	WP_003148484.1	hypothetical protein	-
GNT55_RS29120 (GNT55_29120)	-	6199204..6199509 (-)	306	WP_003148486.1	hypothetical protein	-
GNT55_RS29125 (GNT55_29125)	-	6199506..6199847 (-)	342	WP_094226439.1	hypothetical protein	-

Sequence

Protein

• Length: 714 a.a.
• Molecular weight: 77438.99 Da
• Isoelectric Point: 5.2285

>NTDB_id=351910 GNT55_RS29070 WP_003161249.1 6193063..6195207(-) (pilQ) [Pseudomonas aeruginosa strain SE5416]
MNSGLSRLGIALLAAMFAPALLAADLEKLDVAALPGDRVELKLQFDEPVAAPRGYTIEQPARIALDLPGVQNKLGTKNRE
LSVGNTRSVTVVEAKDRTRLIINLTTLSSYTTRVEGNNLFVVVGNSPAGASVASTAPVKASPAPASYAQPIKPKPYVPAG
RAIRNIDFQRGEKGEGNVVIDLSDPTLSPDIQEQGGKIRLDFAKTQLPDALRVRLDVKDFATPVQFVNASAQSDRTSITI
EPSGLYDYLVYQTDNRLTVSIKPMTTEDAERRKKDNFAYTGEKLSLNFQDIDVRSVLQLIADFTDLNLVASDTVQGNITL
RLQNVPWDQALDLVLKTKGLDKRKLGNVLLVAPADEIAARERQELEAQKQIAELAPLRRELIQVNYAKAADIAKLFQSVT
SDGGQEGKEGGRGSITVDDRTNSIIAYQPQERLDELRRIVSQLDIPVRQVMIEARIVEANVGYDKSLGVRWGGAYHKGNW
SGYGKDGNIGIKDEDGMNCGPIAGSCTFPTTGTSKSPSPFVDLGAKDATSGIGIGFITDNIILDLQLSAMEKTGNGEIVS
QPKVVTSDKETAKILKGSEVPYQEASSSGATSTSFKEAALSLEVTPQITPDNRIIVEVKVTKDAPDYQNMLNGVPPINKN
EVNAKILVNDGETIVIGGVFSNEQSKSVEKVPFLGELPYLGRLFRRDTVTDRKNELLVFLTPRIMNNQAIAIGR

Nucleotide

• Length: 2145 bp

>NTDB_id=351910 GNT55_RS29070 WP_003161249.1 6193063..6195207(-) (pilQ) [Pseudomonas aeruginosa strain SE5416]
ATGAACAGTGGCCTCTCGCGCCTCGGGATCGCTTTGCTGGCCGCCATGTTCGCGCCGGCATTGCTCGCCGCGGACCTGGA
GAAACTCGACGTGGCGGCATTGCCTGGCGACCGGGTCGAGCTAAAGCTGCAGTTCGACGAGCCCGTCGCCGCGCCGCGTG
GCTATACCATCGAGCAGCCGGCGCGAATCGCCCTCGATCTGCCGGGGGTACAGAACAAGCTCGGCACCAAGAACCGCGAG
CTGAGCGTGGGCAATACGCGCAGCGTCACGGTGGTCGAGGCGAAGGATCGCACACGGTTGATCATCAACCTGACCACGTT
GTCGTCCTACACCACCCGGGTGGAAGGCAACAACCTCTTCGTGGTGGTCGGCAATTCGCCGGCCGGCGCCAGCGTCGCTT
CCACCGCTCCGGTCAAGGCAAGCCCGGCTCCGGCCAGCTATGCCCAGCCGATCAAGCCCAAGCCGTACGTGCCGGCGGGT
CGTGCCATTCGCAACATCGATTTCCAGCGTGGCGAAAAGGGCGAGGGCAACGTGGTCATCGACCTGTCCGATCCGACCTT
GAGCCCGGATATCCAGGAGCAGGGCGGCAAGATCCGCCTGGACTTCGCCAAGACCCAACTGCCGGATGCGCTGCGGGTTC
GCCTGGACGTCAAGGACTTCGCCACGCCGGTGCAGTTCGTCAACGCCAGCGCGCAATCCGACCGTACCAGCATCACCATC
GAGCCGAGCGGGCTCTACGACTATCTGGTCTACCAGACCGACAATCGCCTGACCGTCAGCATCAAGCCGATGACCACCGA
AGACGCCGAGCGGCGCAAGAAGGACAATTTCGCCTATACCGGTGAGAAACTGTCGCTGAACTTCCAGGACATCGACGTGC
GTTCGGTACTGCAGCTGATCGCCGACTTCACCGACCTGAACCTGGTGGCCTCGGATACCGTGCAGGGCAATATCACCCTG
CGCCTGCAGAACGTGCCGTGGGACCAGGCGCTGGACCTGGTGCTGAAGACCAAGGGCCTGGACAAGCGCAAGCTCGGCAA
CGTGCTCCTGGTGGCCCCGGCCGACGAGATCGCCGCCCGTGAGCGCCAGGAGCTGGAAGCGCAGAAGCAGATCGCCGAGT
TGGCGCCACTGCGTCGGGAACTGATCCAGGTGAACTACGCCAAGGCCGCGGACATCGCCAAGCTGTTCCAGTCGGTGACC
AGCGATGGTGGCCAGGAAGGCAAGGAAGGTGGGCGCGGCTCGATCACCGTCGACGACCGCACCAACAGTATCATCGCCTA
TCAGCCCCAGGAGCGACTGGACGAACTGCGGCGGATCGTTTCGCAGCTGGATATTCCGGTGCGCCAGGTGATGATCGAGG
CACGCATCGTCGAGGCCAACGTCGGTTACGACAAGAGTCTCGGTGTGCGCTGGGGCGGCGCTTATCACAAGGGCAACTGG
AGCGGCTACGGCAAGGACGGCAATATCGGGATCAAGGACGAGGACGGCATGAACTGCGGCCCGATCGCCGGTAGCTGTAC
CTTCCCGACCACGGGTACCAGCAAGTCGCCGTCGCCGTTCGTCGACCTCGGTGCCAAGGATGCTACCTCCGGGATCGGCA
TCGGCTTCATCACCGACAACATCATCCTCGACCTGCAACTGTCGGCGATGGAAAAGACCGGCAACGGCGAGATCGTCTCC
CAGCCCAAGGTCGTGACCTCGGACAAGGAAACCGCGAAGATCCTGAAGGGCTCGGAAGTCCCCTACCAGGAGGCCAGTTC
CAGCGGCGCTACCAGCACCTCGTTCAAGGAAGCCGCGCTGTCCCTCGAGGTGACCCCGCAGATCACCCCGGACAACCGGA
TCATCGTCGAAGTCAAGGTAACCAAGGACGCGCCGGATTACCAGAATATGTTGAACGGCGTACCTCCTATCAACAAGAAC
GAGGTCAACGCCAAGATCCTGGTCAACGACGGCGAGACCATCGTCATCGGCGGCGTGTTCAGTAACGAGCAGAGCAAGTC
GGTGGAGAAGGTACCCTTCCTCGGCGAACTGCCTTACCTCGGGCGGTTGTTCCGGCGAGATACCGTCACCGACCGGAAAA
ACGAACTTCTGGTTTTCCTGACACCGCGGATCATGAATAATCAGGCCATCGCAATCGGTCGCTGA

Domains

Predicted by InterProScan.

• Bacterial type II/III secretion system short domain (Secretin_N) (381-449)

• Secretin and TonB N terminus short domain (STN) (307-353)

• AMIN domain (AMIN) (38-122)

• Bacterial type II and III secretion system protein (Secretin) (549-705)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Pseudomonas aeruginosa PAK	100	100	1
pilQ	Acinetobacter baumannii D1279779	40.699	100	0.408
pilQ	Acinetobacter baumannii strain A118	40.699	100	0.408
comQ/pilQ	Acinetobacter baylyi ADP1	41.168	98.319	0.405
pilQ	Legionella pneumophila strain Lp02	38.102	95.938	0.366
pilQ	Legionella pneumophila strain ERS1305867	37.956	95.938	0.364