Detailed information NTG0351243

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: AHTJR_RS07390
• Genome accession: NZ_CP038009
• Coordinates: 1559635..1560414 (+)
• Length: 259 a.a.
• NCBI ID: WP_134252176.1
• Uniprot ID: A0A4P7B686
• Organism: Acinetobacter haemolyticus strain TJR01
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1554635..1565414

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AHTJR_RS07355 (AHTJR_07355)	-	1554973..1555956 (+)	984	WP_134252166.1	DNA polymerase III subunit delta'	-
AHTJR_RS07360 (AHTJR_07360)	-	1556100..1556408 (+)	309	WP_134252168.1	hypothetical protein	-
AHTJR_RS07365 (AHTJR_07365)	-	1556731..1557075 (+)	345	WP_100833619.1	PilZ domain-containing protein	-
AHTJR_RS07370 (AHTJR_07370)	-	1557096..1557869 (+)	774	WP_134252170.1	TatD family hydrolase	-
AHTJR_RS07375 (AHTJR_07375)	-	1557911..1558516 (+)	606	WP_134253089.1	TetR/AcrR family transcriptional regulator	-
AHTJR_RS07380 (AHTJR_07380)	-	1558531..1559142 (+)	612	WP_134252172.1	type II secretion system protein	-
AHTJR_RS07385 (AHTJR_07385)	gspI	1559204..1559629 (+)	426	Protein_1432	type II secretion system minor pseudopilin GspI	-
AHTJR_RS07390 (AHTJR_07390)	xcpW	1559635..1560414 (+)	780	WP_134252176.1	type II secretion system minor pseudopilin GspJ	Machinery gene
AHTJR_RS07395 (AHTJR_07395)	gspK	1560416..1561393 (+)	978	WP_005080465.1	type II secretion system minor pseudopilin GspK	-
AHTJR_RS07400 (AHTJR_07400)	-	1561479..1562075 (+)	597	WP_017394547.1	6-pyruvoyl trahydropterin synthase family protein	-
AHTJR_RS07405 (AHTJR_07405)	ung	1562122..1562835 (+)	714	WP_134252178.1	uracil-DNA glycosylase	-
AHTJR_RS07410 (AHTJR_07410)	-	1562832..1563956 (+)	1125	WP_171055793.1	enoyl-CoA hydratase/isomerase family protein	-
AHTJR_RS07415 (AHTJR_07415)	tadA	1563961..1564473 (+)	513	WP_005080470.1	tRNA adenosine(34) deaminase TadA	-
AHTJR_RS07420 (AHTJR_07420)	-	1564541..1564981 (+)	441	WP_004639295.1	SRPBCC family protein	-

Sequence

Protein

• Length: 259 a.a.
• Molecular weight: 30014.24 Da
• Isoelectric Point: 9.1993

>NTDB_id=351243 AHTJR_RS07390 WP_134252176.1 1559635..1560414(+) (xcpW) [Acinetobacter haemolyticus strain TJR01]
MNNKNNNMQISKFHFVNPRTQSLAFRLAERSSSARLNRDHSEHSSSSCARTKFHFVNPRSGFTLVELLVAIAIFAVLSML
GWKVFDYLLKVKDRNAEHEVNLFALQDAYQQILRDSLQIIPLTANDGRQLQAALVLNDQVFMFSKAGVSDPLMQGLSPYE
RIEYRFDESQKRLYRLKYTNLNIPNRVQPMSSVLLDNVERFKVSVFNPQELMQWPENNVDPENTAELRKLPLGLKIQLTV
AGTDYEWIYRLIDRSQDSQ

Nucleotide

• Length: 780 bp

>NTDB_id=351243 AHTJR_RS07390 WP_134252176.1 1559635..1560414(+) (xcpW) [Acinetobacter haemolyticus strain TJR01]
ATGAATAATAAAAACAATAATATGCAAATCTCAAAGTTTCACTTTGTTAATCCTCGTACTCAAAGCCTAGCTTTTCGTCT
TGCGGAGCGGTCGAGCAGTGCTCGACTTAATCGTGATCACTCTGAACATAGTTCGTCATCTTGCGCTCGGACAAAGTTTC
ACTTTGTTAATCCTCGCTCAGGATTTACGTTGGTTGAGTTGCTGGTTGCAATTGCAATTTTTGCAGTTCTTTCTATGTTA
GGTTGGAAAGTATTTGATTATTTGTTAAAAGTGAAAGATCGAAATGCTGAACATGAAGTGAATTTGTTTGCATTACAAGA
CGCTTATCAGCAGATCTTGCGAGATAGTTTGCAGATCATCCCTTTAACAGCAAATGATGGAAGGCAATTGCAAGCTGCAT
TGGTACTTAATGATCAGGTTTTTATGTTTAGTAAAGCTGGTGTTTCTGATCCGCTTATGCAAGGGTTGTCGCCATACGAG
CGTATCGAATATCGTTTTGATGAGTCTCAAAAAAGACTATATCGATTGAAATACACAAATCTAAATATTCCAAATCGTGT
GCAGCCGATGTCAAGTGTATTGTTGGATAATGTTGAGCGCTTTAAAGTATCAGTTTTCAATCCACAAGAGTTAATGCAGT
GGCCTGAAAATAATGTAGATCCAGAAAACACGGCTGAATTAAGAAAGCTACCATTAGGATTGAAAATTCAATTGACTGTT
GCTGGTACAGATTATGAGTGGATCTATCGTCTGATCGATCGTAGTCAGGATAGTCAATGA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (114-243)

• Prokaryotic N-terminal methylation motif (N_methyl) (58-80)

3D structure

• AlphaFold DB: A0A4P7B686

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	64.935	89.189	0.579