Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | EZZ25_RS02385 | Genome accession | NZ_CP036499 |
| Coordinates | 499388..499921 (-) | Length | 177 a.a. |
| NCBI ID | WP_000168287.1 | Uniprot ID | A0A2A1YRC3 |
| Organism | Vibrio cholerae strain 20000 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 494388..504921
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EZZ25_RS02365 (EZZ25_02365) | - | 494843..495160 (-) | 318 | WP_000252812.1 | MSHA biogenesis protein MshK | - |
| EZZ25_RS02370 (EZZ25_02370) | gspM | 495153..495803 (-) | 651 | WP_001256322.1 | type II secretion system protein GspM | - |
| EZZ25_RS02375 (EZZ25_02375) | - | 495800..497239 (-) | 1440 | WP_000743255.1 | PilN domain-containing protein | - |
| EZZ25_RS02380 (EZZ25_02380) | csrD | 497252..499264 (-) | 2013 | WP_002022932.1 | RNase E specificity factor CsrD | - |
| EZZ25_RS02385 (EZZ25_02385) | ssb | 499388..499921 (-) | 534 | WP_000168287.1 | single-stranded DNA-binding protein | Machinery gene |
| EZZ25_RS02390 (EZZ25_02390) | qstR | 500213..500857 (+) | 645 | WP_001188315.1 | LuxR C-terminal-related transcriptional regulator | Regulator |
| EZZ25_RS02395 (EZZ25_02395) | galU | 501030..501902 (+) | 873 | WP_001920788.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| EZZ25_RS02400 (EZZ25_02400) | uvrA | 502058..504880 (+) | 2823 | WP_000357697.1 | excinuclease ABC subunit UvrA | - |
Sequence
Protein
Download Length: 177 a.a. Molecular weight: 19644.85 Da Isoelectric Point: 5.7626
>NTDB_id=349215 EZZ25_RS02385 WP_000168287.1 499388..499921(-) (ssb) [Vibrio cholerae strain 20000]
MASRGVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKATGEQKEKTEWHRVTLYGKLAEVAGEYLRKGSQVYI
EGQLQTRKWQDQSGQDRYSTEVVVQGYNGIMQMLGGRAQQGGMPAQGGMNAPAQQGSWGQPQQPAKQHQPMQQSAPQQYS
QPQYNEPPMDFDDDIPF
MASRGVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKATGEQKEKTEWHRVTLYGKLAEVAGEYLRKGSQVYI
EGQLQTRKWQDQSGQDRYSTEVVVQGYNGIMQMLGGRAQQGGMPAQGGMNAPAQQGSWGQPQQPAKQHQPMQQSAPQQYS
QPQYNEPPMDFDDDIPF
Nucleotide
Download Length: 534 bp
>NTDB_id=349215 EZZ25_RS02385 WP_000168287.1 499388..499921(-) (ssb) [Vibrio cholerae strain 20000]
ATGGCAAGCCGTGGCGTGAACAAAGTAATTTTGATTGGTAACTTAGGCCAAGATCCTGAAGTGCGTTATATGCCAAGCGG
CGGCGCAGTAGCGAATATCACCATCGCGACCTCCGAAACCTGGCGTGATAAAGCTACAGGTGAACAGAAGGAAAAAACCG
AATGGCACCGAGTTACTCTGTATGGAAAATTGGCAGAAGTGGCTGGTGAATATTTGCGCAAAGGTTCTCAAGTTTACATT
GAAGGCCAACTGCAAACGCGTAAGTGGCAAGATCAAAGTGGTCAAGATCGCTACTCAACCGAAGTGGTTGTACAAGGCTA
TAACGGCATCATGCAGATGCTGGGTGGACGTGCACAGCAAGGTGGAATGCCAGCCCAAGGCGGCATGAATGCTCCTGCGC
AGCAAGGAAGTTGGGGACAACCACAACAACCGGCGAAGCAGCATCAGCCTATGCAACAATCTGCGCCTCAACAGTACTCG
CAACCGCAGTATAATGAGCCGCCGATGGATTTTGATGACGACATCCCGTTTTAG
ATGGCAAGCCGTGGCGTGAACAAAGTAATTTTGATTGGTAACTTAGGCCAAGATCCTGAAGTGCGTTATATGCCAAGCGG
CGGCGCAGTAGCGAATATCACCATCGCGACCTCCGAAACCTGGCGTGATAAAGCTACAGGTGAACAGAAGGAAAAAACCG
AATGGCACCGAGTTACTCTGTATGGAAAATTGGCAGAAGTGGCTGGTGAATATTTGCGCAAAGGTTCTCAAGTTTACATT
GAAGGCCAACTGCAAACGCGTAAGTGGCAAGATCAAAGTGGTCAAGATCGCTACTCAACCGAAGTGGTTGTACAAGGCTA
TAACGGCATCATGCAGATGCTGGGTGGACGTGCACAGCAAGGTGGAATGCCAGCCCAAGGCGGCATGAATGCTCCTGCGC
AGCAAGGAAGTTGGGGACAACCACAACAACCGGCGAAGCAGCATCAGCCTATGCAACAATCTGCGCCTCAACAGTACTCG
CAACCGCAGTATAATGAGCCGCCGATGGATTTTGATGACGACATCCCGTTTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
99.435 |
100 |
0.994 |
| ssb | Glaesserella parasuis strain SC1401 |
52.198 |
100 |
0.537 |
| ssb | Neisseria meningitidis MC58 |
47.778 |
100 |
0.486 |
| ssb | Neisseria gonorrhoeae MS11 |
47.778 |
100 |
0.486 |