Detailed information    

insolico Bioinformatically predicted

Overview

Name   htrA   Type   Regulator
Locus tag   GII86_RS21520 Genome accession   NZ_CP045816
Coordinates   4047539..4048741 (-) Length   400 a.a.
NCBI ID   WP_046161071.1    Uniprot ID   -
Organism   Bacillus subtilis strain P5_B2     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4042539..4053741
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII86_RS21485 (GII86_21485) - 4043017..4043970 (-) 954 WP_014481469.1 sporulation-delaying protein SdpB family protein -
  GII86_RS21490 (GII86_21490) - 4043955..4044509 (-) 555 WP_015715050.1 SdpA family antimicrobial peptide system protein -
  GII86_RS21495 (GII86_21495) - 4044693..4045328 (-) 636 WP_014481470.1 SdpI family protein -
  GII86_RS21500 (GII86_21500) - 4045328..4045612 (-) 285 WP_015715052.1 autorepressor SdpR family transcription factor -
  GII86_RS21505 (GII86_21505) rocR 4045839..4047224 (+) 1386 WP_003244510.1 arginine utilization regulatory protein RocR -
  GII86_RS21510 (GII86_21510) - 4047206..4047358 (-) 153 Protein_4228 ATP-binding protein -
  GII86_RS21515 (GII86_21515) - 4047386..4047518 (-) 133 Protein_4229 hypothetical protein -
  GII86_RS21520 (GII86_21520) htrA 4047539..4048741 (-) 1203 WP_046161071.1 serine protease HtrC Regulator
  GII86_RS21525 (GII86_21525) vicX 4048823..4049617 (-) 795 WP_003226939.1 MBL fold metallo-hydrolase Regulator
  GII86_RS21530 (GII86_21530) walI 4049639..4050481 (-) 843 WP_046161072.1 WalRK two-component regulatory system regulator WalI -
  GII86_RS21535 (GII86_21535) walH 4050468..4051835 (-) 1368 WP_046161103.1 WalRK two-component regulatory system regulator WalH -
  GII86_RS21540 (GII86_21540) walK 4051825..4053660 (-) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -

Sequence

Protein


Download         Length: 400 a.a.        Molecular weight: 42733.46 Da        Isoelectric Point: 5.1904

>NTDB_id=346722 GII86_RS21520 WP_046161071.1 4047539..4048741(-) (htrA) [Bacillus subtilis strain P5_B2]
MVDYEREEEHTTPEQPKRSKKGYFLSSLIGVIVGAVLMAFIMPYLSNEGLDTGALDQQQNNNGRESIRTVNVSVNNAVTK
IVSNVSPAVVGVVNIQKSDIWGESGEAGSGSGVIYKKNDNSAYVVTNHHVIEGASQIEISLKDGSRVSADLVGSDQLMDL
AVLRVKSDKIKAVADFGNSDKVKSGEPVIAIGNPLGLEFAGSVTQGVISGTERAIPVDSNGDGQPDWNAEVLQTDAAINP
GNSGGALLNMDGKVIGINSMKIAESAVEGIGLSIPSKLVIPVIEDLERYGKVKRPFLGIEMKSLSDIASYHWDETLKLPK
NVTNGAVVMGVDAFSPAGKAGLKELDVITEFDGYKVNDIVDLRKRLYQKKVGDRVKVKFYRGGKEKSVDIKLSSADQLGS

Nucleotide


Download         Length: 1203 bp        

>NTDB_id=346722 GII86_RS21520 WP_046161071.1 4047539..4048741(-) (htrA) [Bacillus subtilis strain P5_B2]
ATGGTGGATTACGAACGTGAGGAAGAACATACTACTCCTGAACAGCCAAAGAGAAGCAAAAAAGGATATTTTCTTTCAAG
CCTGATTGGCGTGATTGTCGGTGCCGTATTAATGGCGTTTATCATGCCGTACCTTTCAAATGAAGGGCTGGATACAGGCG
CCTTAGATCAGCAGCAAAACAACAATGGCCGGGAATCAATCAGGACGGTGAATGTCAGTGTCAACAATGCCGTCACCAAG
ATTGTCAGCAATGTGTCGCCCGCCGTTGTCGGTGTTGTGAACATCCAAAAATCAGATATTTGGGGAGAGAGCGGCGAGGC
TGGGAGCGGCTCTGGCGTCATCTATAAGAAAAATGACAACTCCGCTTATGTCGTGACCAACCATCATGTCATCGAAGGCG
CTTCCCAAATTGAAATCAGCTTGAAAGACGGTTCACGTGTATCAGCTGATCTTGTCGGCAGCGACCAGCTGATGGACCTT
GCCGTTTTACGGGTGAAAAGCGATAAAATTAAAGCAGTCGCCGATTTCGGAAATTCAGATAAAGTGAAGTCTGGCGAGCC
GGTTATTGCGATCGGGAACCCGTTAGGCCTTGAGTTTGCAGGCTCTGTCACACAAGGCGTCATCTCAGGTACGGAGAGGG
CGATCCCAGTGGATTCAAACGGTGATGGACAGCCTGACTGGAACGCAGAAGTCCTGCAAACAGATGCGGCCATTAACCCT
GGGAACAGCGGCGGTGCTTTGTTAAATATGGATGGGAAGGTCATTGGCATCAATTCAATGAAAATTGCCGAGTCGGCGGT
TGAAGGGATTGGCCTGTCGATTCCATCTAAGCTCGTGATCCCTGTGATAGAGGATTTAGAGAGATACGGAAAGGTCAAAC
GCCCGTTCCTTGGGATTGAGATGAAATCGCTAAGCGACATTGCAAGCTATCATTGGGATGAAACATTAAAGCTTCCTAAG
AATGTTACCAATGGAGCGGTTGTGATGGGTGTAGACGCCTTTTCACCTGCCGGAAAAGCGGGGCTGAAGGAACTGGATGT
CATTACGGAATTTGATGGATACAAGGTAAATGATATTGTTGACCTGCGAAAACGGCTTTATCAGAAAAAAGTCGGTGACC
GGGTGAAGGTGAAGTTTTACCGCGGCGGAAAAGAAAAATCTGTAGACATCAAGCTGTCCTCCGCAGACCAATTAGGCAGT
TAA

Domains

Predicted by InterProScan.

PDZ domain (PDZ_2)

(295-392)

Trypsin-like peptidase domain (Trypsin_2)

(110-257)

Peptidase family M50 (Peptidase_M50)

(199-395)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

43.829

99.25

0.435
  htrA Streptococcus gordonii str. Challis substr. CH1

41.542

100

0.417
  htrA Streptococcus mitis NCTC 12261

43.005

96.5

0.415
  htrA Streptococcus pneumoniae TIGR4

45.152

82.5

0.373
  htrA Streptococcus pneumoniae D39

45.152

82.5

0.373
  htrA Streptococcus pneumoniae Rx1

45.152

82.5

0.373
  htrA Streptococcus pneumoniae R6

45.152

82.5

0.373