Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   GII86_RS21525 Genome accession   NZ_CP045816
Coordinates   4048823..4049617 (-) Length   264 a.a.
NCBI ID   WP_003226939.1    Uniprot ID   A0ABU0V6L5
Organism   Bacillus subtilis strain P5_B2     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4043823..4054617
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII86_RS21490 (GII86_21490) - 4043955..4044509 (-) 555 WP_015715050.1 SdpA family antimicrobial peptide system protein -
  GII86_RS21495 (GII86_21495) - 4044693..4045328 (-) 636 WP_014481470.1 SdpI family protein -
  GII86_RS21500 (GII86_21500) - 4045328..4045612 (-) 285 WP_015715052.1 autorepressor SdpR family transcription factor -
  GII86_RS21505 (GII86_21505) rocR 4045839..4047224 (+) 1386 WP_003244510.1 arginine utilization regulatory protein RocR -
  GII86_RS21510 (GII86_21510) - 4047206..4047358 (-) 153 Protein_4228 ATP-binding protein -
  GII86_RS21515 (GII86_21515) - 4047386..4047518 (-) 133 Protein_4229 hypothetical protein -
  GII86_RS21520 (GII86_21520) htrA 4047539..4048741 (-) 1203 WP_046161071.1 serine protease HtrC Regulator
  GII86_RS21525 (GII86_21525) vicX 4048823..4049617 (-) 795 WP_003226939.1 MBL fold metallo-hydrolase Regulator
  GII86_RS21530 (GII86_21530) walI 4049639..4050481 (-) 843 WP_046161072.1 WalRK two-component regulatory system regulator WalI -
  GII86_RS21535 (GII86_21535) walH 4050468..4051835 (-) 1368 WP_046161103.1 WalRK two-component regulatory system regulator WalH -
  GII86_RS21540 (GII86_21540) walK 4051825..4053660 (-) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  GII86_RS21545 (GII86_21545) walR 4053668..4054375 (-) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29283.28 Da        Isoelectric Point: 5.8036

>NTDB_id=346723 GII86_RS21525 WP_003226939.1 4048823..4049617(-) (vicX) [Bacillus subtilis strain P5_B2]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=346723 GII86_RS21525 WP_003226939.1 4048823..4049617(-) (vicX) [Bacillus subtilis strain P5_B2]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCAATGGAGAC
GGTGAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTTTCCCACGATGCGGCGGAACCGATGTTTTATGTGTTCC
ATTATAACGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGGATGAAAGGCATTATCCGTTCAGCG
AATGTATTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGGAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTTTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCCGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACTGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53

Multiple sequence alignment