Detailed information NTG0034672

Bioinformatically predicted

Overview

• Name: ciaR
• Type: Regulator
• Locus tag: SSUBM407_RS04455
• Genome accession: NC_012926
• Coordinates: 907317..907988 (+)
• Length: 223 a.a.
• NCBI ID: WP_009909965.1
• Uniprot ID: A0A075SH40
• Organism: Streptococcus suis BM407
• Function: repress competence development (predicted from homology) Competence regulation

Genomic Context

Location: 902317..912988

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SSUBM407_RS04430 (SSUBM407_0834)	pstB	902696..903499 (+)	804	WP_002940866.1	phosphate ABC transporter ATP-binding protein PstB	-
SSUBM407_RS04435 (SSUBM407_0835)	pstB	903511..904269 (+)	759	WP_012775587.1	phosphate ABC transporter ATP-binding protein PstB	-
SSUBM407_RS04440 (SSUBM407_0836)	phoU	904298..904954 (+)	657	WP_012028219.1	phosphate signaling complex protein PhoU	-
SSUBM407_RS04445 (SSUBM407_0837)	-	905156..906358 (-)	1203	WP_012775158.1	IS110 family transposase	-
SSUBM407_RS04450 (SSUBM407_0838)	-	906743..907123 (+)	381	WP_012027076.1	hypothetical protein	-
SSUBM407_RS04455 (SSUBM407_0839)	ciaR	907317..907988 (+)	672	WP_009909965.1	response regulator transcription factor	Regulator
SSUBM407_RS04460 (SSUBM407_0840)	ciaH	907981..909360 (+)	1380	WP_012775588.1	sensor histidine kinase	Regulator
SSUBM407_RS10720	-	909691..910290 (+)	600	WP_228475119.1	hypothetical protein	-
SSUBM407_RS10725	-	910277..910909 (+)	633	WP_231844636.1	transglutaminase domain-containing protein	-
SSUBM407_RS04470 (SSUBM407_0842)	tnpA	911323..911787 (+)	465	WP_012775157.1	IS200/IS605-like element ISSsu4 family transposase	-
SSUBM407_RS04475 (SSUBM407_0843)	rpsT	911929..912177 (-)	249	WP_012027069.1	30S ribosomal protein S20	-

Sequence

Protein

• Length: 223 a.a.
• Molecular weight: 25290.00 Da
• Isoelectric Point: 4.2183

>NTDB_id=34672 SSUBM407_RS04455 WP_009909965.1 907317..907988(+) (ciaR) [Streptococcus suis BM407]
MIKILLVEDDLSLSNSVFDFLDDFADVMQVFDGEEGVYEAETGVYDLILLDLMLPEKDGFQVLKELREKGVTTPVLITTA
KESLEDKGHGFELGADDYLTKPFYLEELKMRIQALLKRAGKFNENTLTFGDVTVDLSTNMTMVNGEEVELLGKEFDLLVY
FLQNQNVILPKTQIFDRIWGFDSDTTISVVEVYVSKIRKKLKGTTFGENLQTLRSVGYILKNA

Nucleotide

• Length: 672 bp

>NTDB_id=34672 SSUBM407_RS04455 WP_009909965.1 907317..907988(+) (ciaR) [Streptococcus suis BM407]
ATGATTAAAATATTGTTAGTGGAAGATGATTTAAGTCTATCAAATTCTGTTTTCGATTTCTTAGATGATTTTGCGGATGT
TATGCAGGTTTTTGATGGTGAAGAGGGCGTTTATGAGGCGGAAACAGGCGTTTATGATTTGATTCTTTTGGATTTAATGT
TACCTGAAAAAGACGGCTTTCAAGTCTTGAAAGAGTTACGTGAAAAGGGGGTTACGACACCAGTTCTGATTACAACAGCC
AAGGAAAGTCTAGAGGATAAAGGCCATGGTTTTGAATTGGGGGCTGATGACTATTTGACAAAACCGTTTTATTTAGAAGA
ATTGAAGATGCGAATTCAAGCTCTATTAAAACGAGCGGGTAAGTTTAATGAAAACACACTAACCTTTGGAGATGTGACAG
TTGACCTATCTACAAATATGACGATGGTAAATGGCGAAGAAGTTGAACTGTTAGGAAAAGAATTTGATCTACTAGTTTAT
TTCTTGCAAAATCAAAATGTTATTTTGCCAAAAACACAAATTTTTGACCGTATTTGGGGCTTTGATAGTGATACTACAAT
TTCAGTAGTAGAGGTATATGTTTCTAAAATTAGGAAAAAGTTGAAAGGAACGACTTTTGGGGAAAATCTTCAAACCCTGC
GTAGTGTCGGATACATTCTAAAAAATGCCTAA

Domains

Predicted by InterProScan.

• Response regulator receiver domain (Response_reg) (4-112)

• Transcriptional regulatory protein, C terminal (Trans_reg_C) (145-220)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ciaR	Streptococcus mutans UA159	90.135	100	0.901
ciaR	Streptococcus pneumoniae Rx1	88.341	100	0.883
ciaR	Streptococcus pneumoniae D39	88.341	100	0.883
ciaR	Streptococcus pneumoniae R6	88.341	100	0.883
ciaR	Streptococcus pneumoniae TIGR4	88.341	100	0.883
covR	Lactococcus lactis subsp. lactis strain DGCC12653	38.496	100	0.39
vicR	Streptococcus mutans UA159	35.47	100	0.372
covR	Streptococcus salivarius strain HSISS4	35.841	100	0.363