Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | EXW63_RS13840 | Genome accession | NZ_CP035997 |
| Coordinates | 2739754..2740038 (+) | Length | 94 a.a. |
| NCBI ID | WP_000843037.1 | Uniprot ID | A0A366FUU6 |
| Organism | Bacillus mycoides strain BPN36/3 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2734754..2745038
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW63_RS13825 (EXW63_14140) | rnmV | 2735499..2736056 (-) | 558 | WP_002029323.1 | ribonuclease M5 | - |
| EXW63_RS13830 (EXW63_14145) | - | 2736317..2737084 (-) | 768 | WP_215551291.1 | TatD family hydrolase | - |
| EXW63_RS13835 (EXW63_14150) | metG | 2737250..2739232 (-) | 1983 | WP_002029324.1 | methionine--tRNA ligase | - |
| EXW63_RS13840 (EXW63_14155) | abrB | 2739754..2740038 (+) | 285 | WP_000843037.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| EXW63_RS13845 (EXW63_14160) | rsmI | 2740059..2740934 (-) | 876 | WP_002143972.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| EXW63_RS13850 (EXW63_14165) | - | 2740903..2741193 (-) | 291 | WP_002130207.1 | GIY-YIG nuclease family protein | - |
| EXW63_RS13855 (EXW63_14170) | - | 2741180..2741920 (-) | 741 | WP_002138893.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| EXW63_RS13860 (EXW63_14175) | yabA | 2742041..2742391 (-) | 351 | WP_002009639.1 | DNA replication initiation control protein YabA | - |
| EXW63_RS13865 (EXW63_14180) | - | 2742406..2743233 (-) | 828 | WP_002009637.1 | stage 0 sporulation family protein | - |
| EXW63_RS13870 (EXW63_14185) | holB | 2743239..2744222 (-) | 984 | WP_159147370.1 | DNA polymerase III subunit delta' | - |
| EXW63_RS13875 (EXW63_14190) | tmk | 2744258..2744884 (-) | 627 | WP_215551292.1 | dTMP kinase | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10476.14 Da Isoelectric Point: 4.7174
>NTDB_id=345674 EXW63_RS13840 WP_000843037.1 2739754..2740038(+) (abrB) [Bacillus mycoides strain BPN36/3]
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QVLNELQDYIETAK
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QVLNELQDYIETAK
Nucleotide
Download Length: 285 bp
>NTDB_id=345674 EXW63_RS13840 WP_000843037.1 2739754..2740038(+) (abrB) [Bacillus mycoides strain BPN36/3]
ATGAAATCTACTGGTATCGTTCGTAAAGTTGATGAATTGGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCTCTTGAAATCTACGTTGATGATGAAAAAATCATCTTAAAGAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGATGGTAACCTATCTTTAGCTGAAGGTAAAATTATCTTAAGTAAAGAAGGCGCTGAA
CAAGTCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
ATGAAATCTACTGGTATCGTTCGTAAAGTTGATGAATTGGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCTCTTGAAATCTACGTTGATGATGAAAAAATCATCTTAAAGAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGATGGTAACCTATCTTTAGCTGAAGGTAAAATTATCTTAAGTAAAGAAGGCGCTGAA
CAAGTCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
84.043 |
100 |
0.84 |