Detailed information NTG0345676

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: EXW63_RS14040
• Genome accession: NZ_CP035997
• Coordinates: 2776377..2777504 (-)
• Length: 375 a.a.
• NCBI ID: WP_002016486.1
• Uniprot ID: -
• Organism: Bacillus mycoides strain BPN36/3
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2771377..2782504

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EXW63_RS14030 (EXW63_14345)	gyrA	2771856..2774327 (-)	2472	WP_002016488.1	DNA gyrase subunit A	-
EXW63_RS14035 (EXW63_14350)	gyrB	2774416..2776338 (-)	1923	WP_002034986.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
EXW63_RS14040 (EXW63_14355)	recF	2776377..2777504 (-)	1128	WP_002016486.1	DNA replication/repair protein RecF	Machinery gene
EXW63_RS14045 (EXW63_14360)	yaaA	2777517..2777729 (-)	213	WP_002016484.1	S4 domain-containing protein YaaA	-
EXW63_RS14050 (EXW63_14365)	dnaN	2777858..2779003 (-)	1146	WP_002034988.1	DNA polymerase III subunit beta	-
EXW63_RS14055 (EXW63_14370)	dnaA	2779186..2780526 (-)	1341	WP_002016481.1	chromosomal replication initiator protein DnaA	-
EXW63_RS14060 (EXW63_14375)	rpmH	2781090..2781224 (+)	135	WP_000831901.1	50S ribosomal protein L34	-
EXW63_RS14065 (EXW63_14380)	rnpA	2781301..2781648 (+)	348	WP_215551295.1	ribonuclease P protein component	-
EXW63_RS14070 (EXW63_14385)	spoIIIJ	2781701..2782468 (+)	768	WP_002130197.1	YidC family membrane integrase SpoIIIJ	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 43500.76 Da
• Isoelectric Point: 6.8418

>NTDB_id=345676 EXW63_RS14040 WP_002016486.1 2776377..2777504(-) (recF) [Bacillus mycoides strain BPN36/3]
MFITEIQLKNYRNYEHLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRELIRWDEDYGNIKGRLQRRNSS
VSLELNISKKGKKAKLNQLEQQKLSQYIGEMNVVMFAPEDLNLVKGSPQVRRRFLDMELGQIAPVYLYELSQYQKVLTQR
NHLLKKMQGNSKNEETMLDVFTLQLIEHGAKILRKRFEFLHLLQEWAAPIHRGISRGLEELEIVYKPSVDVSESMDLSKI
KEVYYESFQSVKQREIFRGTTLLGPHRDDLQFFVNSKNVQVFGSQGQQRTTALSLKLAEIELIYSEVKEYPILLLDDVLS
ELDDYRQSHLLNTIQGKVQTFVTTTSVEGIEHETLKEAKTIHVTNGTVDCEIDRK

Nucleotide

• Length: 1128 bp

>NTDB_id=345676 EXW63_RS14040 WP_002016486.1 2776377..2777504(-) (recF) [Bacillus mycoides strain BPN36/3]
TTGTTTATTACAGAAATACAATTAAAAAACTATCGCAATTATGAGCATTTAGAGCTTTCCTTTGAGGATAAAGTCAATGT
AATTATTGGTGAAAATGCGCAAGGGAAAACGAATCTGATGGAAGCTATTTATGTATTGGCGATGGCGAAATCTCATAGAA
CTTCGAACGATCGTGAACTCATTCGTTGGGATGAGGATTATGGTAATATAAAAGGTAGATTACAAAGGCGAAATAGTTCA
GTATCCTTAGAATTAAACATTTCAAAAAAAGGTAAAAAGGCAAAGTTAAATCAGTTAGAACAACAAAAATTGAGCCAGTA
TATTGGTGAAATGAATGTTGTTATGTTTGCCCCAGAAGATTTAAATCTTGTAAAAGGAAGCCCTCAAGTACGAAGACGCT
TTTTGGATATGGAACTTGGACAAATAGCTCCGGTCTATTTGTATGAATTAAGTCAATATCAAAAGGTACTCACGCAACGA
AATCATTTACTTAAGAAGATGCAAGGGAATAGTAAAAATGAGGAAACGATGTTGGATGTATTTACACTTCAACTTATTGA
GCATGGTGCAAAAATTTTGCGAAAACGTTTTGAGTTTTTGCATTTACTACAAGAATGGGCTGCTCCAATTCATCGGGGAA
TTAGCAGGGGATTAGAGGAGTTAGAAATCGTTTATAAACCAAGTGTAGATGTATCAGAATCAATGGATTTGTCGAAAATA
AAGGAAGTATACTATGAAAGTTTTCAATCTGTGAAACAACGTGAAATTTTCCGGGGTACAACTTTACTTGGTCCTCATCG
TGATGATTTACAATTCTTCGTTAATAGTAAAAATGTTCAAGTCTTTGGTTCACAAGGACAACAACGAACAACCGCACTAT
CCCTAAAATTGGCTGAAATTGAATTGATATACTCAGAGGTTAAGGAATATCCAATTCTTTTACTAGATGATGTGTTATCA
GAATTAGATGATTATCGTCAATCGCATCTGCTAAATACAATTCAAGGAAAAGTACAAACCTTTGTGACAACGACGAGTGT
CGAGGGAATTGAACACGAAACATTGAAAGAAGCGAAAACAATTCATGTAACGAACGGCACGGTAGATTGTGAAATAGACA
GAAAATAA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	66.848	98.133	0.656