Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | EXW63_RS04350 | Genome accession | NZ_CP035997 |
| Coordinates | 856225..856512 (-) | Length | 95 a.a. |
| NCBI ID | WP_002012401.1 | Uniprot ID | A0A366G1Y4 |
| Organism | Bacillus mycoides strain BPN36/3 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 851225..861512
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW63_RS04320 (EXW63_04425) | - | 851901..852428 (-) | 528 | WP_215552492.1 | DinB family protein | - |
| EXW63_RS04325 (EXW63_04430) | - | 852625..852972 (+) | 348 | WP_000426320.1 | DUF4257 domain-containing protein | - |
| EXW63_RS04330 (EXW63_04435) | - | 853057..853281 (+) | 225 | WP_002141385.1 | hypothetical protein | - |
| EXW63_RS29200 (EXW63_04440) | - | 853338..853544 (-) | 207 | Protein_886 | hypothetical protein | - |
| EXW63_RS04335 (EXW63_04445) | - | 853594..854529 (-) | 936 | WP_215552493.1 | aldo/keto reductase | - |
| EXW63_RS04340 (EXW63_04450) | - | 854637..854945 (+) | 309 | WP_001259916.1 | helix-turn-helix transcriptional regulator | - |
| EXW63_RS04345 (EXW63_04455) | - | 854986..855936 (-) | 951 | WP_002012402.1 | serine protease | - |
| EXW63_RS04350 (EXW63_04460) | abrB | 856225..856512 (-) | 288 | WP_002012401.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| EXW63_RS04355 (EXW63_04465) | - | 856632..858512 (-) | 1881 | WP_215552494.1 | ABC transporter permease | - |
| EXW63_RS04360 (EXW63_04470) | nadE | 858777..859595 (+) | 819 | WP_215552495.1 | ammonia-dependent NAD(+) synthetase | - |
| EXW63_RS04365 (EXW63_04475) | - | 859640..860101 (-) | 462 | WP_002141378.1 | NUDIX hydrolase | - |
| EXW63_RS04370 (EXW63_04480) | - | 860129..860329 (-) | 201 | WP_215552496.1 | DUF4083 domain-containing protein | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10647.42 Da Isoelectric Point: 6.9795
>NTDB_id=345655 EXW63_RS04350 WP_002012401.1 856225..856512(-) (abrB) [Bacillus mycoides strain BPN36/3]
MKATGIIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSDQNISLANGNITVSIEGAK
HVIKEIEQFLNKSKI
MKATGIIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSDQNISLANGNITVSIEGAK
HVIKEIEQFLNKSKI
Nucleotide
Download Length: 288 bp
>NTDB_id=345655 EXW63_RS04350 WP_002012401.1 856225..856512(-) (abrB) [Bacillus mycoides strain BPN36/3]
ATGAAAGCAACAGGAATTATTCGAAAAGTAGATGAATTGGGACGGATAGTTATTCCTAAAGAATTACGAGATGTATTAGG
AATACAAATCAAATCACCACTTGAAATTTTTGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAGACCAAAATATTTCATTAGCAAATGGAAACATTACTGTTAGTATAGAAGGCGCAAAA
CATGTAATAAAAGAAATTGAGCAGTTTTTGAACAAGAGTAAGATTTAG
ATGAAAGCAACAGGAATTATTCGAAAAGTAGATGAATTGGGACGGATAGTTATTCCTAAAGAATTACGAGATGTATTAGG
AATACAAATCAAATCACCACTTGAAATTTTTGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAGACCAAAATATTTCATTAGCAAATGGAAACATTACTGTTAGTATAGAAGGCGCAAAA
CATGTAATAAAAGAAATTGAGCAGTTTTTGAACAAGAGTAAGATTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
56.383 |
98.947 |
0.558 |