Detailed information NTG0344937

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: GEV49_RS32785
• Genome accession: NZ_CP045547
• Coordinates: 7300278..7300922 (-)
• Length: 214 a.a.
• NCBI ID: WP_153180923.1
• Uniprot ID: -
• Organism: Streptomyces sp. SYP-A7193
• Function: degradation of ComX; degradation of ComW (predicted from homology) Competence regulation

Genomic Context

Location: 7295278..7305922

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GEV49_RS32755 (GEV49_33065)	-	7295987..7297114 (+)	1128	WP_153180919.1	8-amino-7-oxononanoate synthase	-
GEV49_RS32760 (GEV49_33070)	-	7297157..7297387 (-)	231	WP_153182075.1	DUF397 domain-containing protein	-
GEV49_RS32765 (GEV49_33075)	-	7297409..7298269 (-)	861	WP_153180920.1	helix-turn-helix domain-containing protein	-
GEV49_RS32770 (GEV49_33080)	-	7298486..7298998 (+)	513	WP_153180921.1	ATP-binding protein	-
GEV49_RS32775 (GEV49_33085)	-	7298969..7299442 (-)	474	WP_054102732.1	C40 family peptidase	-
GEV49_RS32780 (GEV49_33090)	-	7299961..7300269 (-)	309	WP_153180922.1	hypothetical protein	-
GEV49_RS32785 (GEV49_33095)	clpP	7300278..7300922 (-)	645	WP_153180923.1	ATP-dependent Clp protease proteolytic subunit	Regulator
GEV49_RS32790 (GEV49_33100)	-	7301033..7301317 (+)	285	WP_153180924.1	type II toxin-antitoxin system Phd/YefM family antitoxin	-
GEV49_RS32795 (GEV49_33105)	-	7301542..7301844 (+)	303	WP_153180925.1	urease subunit gamma	-
GEV49_RS32800 (GEV49_33110)	-	7301858..7302169 (+)	312	WP_007447081.1	urease subunit beta	-
GEV49_RS32805 (GEV49_33115)	-	7302162..7303883 (+)	1722	WP_153180926.1	urease subunit alpha	-
GEV49_RS32810 (GEV49_33120)	-	7303892..7304566 (+)	675	WP_153180927.1	urease accessory protein UreF	-
GEV49_RS32815 (GEV49_33125)	ureG	7304734..7305411 (+)	678	WP_153180928.1	urease accessory protein UreG	-

Sequence

Protein

• Length: 214 a.a.
• Molecular weight: 22833.76 Da
• Isoelectric Point: 6.4920

>NTDB_id=344937 GEV49_RS32785 WP_153180923.1 7300278..7300922(-) (clpP) [Streptomyces sp. SYP-A7193]
MTRPSARHVLPGFTERTSAGARTTDPYSELLRERIVFLGTPVDETSANDVTAQFMYLEHQAPDRDIELYVNSPGGSFTAM
TAIYDTMRHVACDVATTCLGQAGSSAAVLLAAGTPGKRAVLPGARVVLHQPAPTEPLEGPANDLAVRAAELLRARARLEE
ILVRHTGRSPGQVHADIERDTVLDAQQALAYGLVDRIVADRRASSVPSSAPGAR

Nucleotide

• Length: 645 bp

>NTDB_id=344937 GEV49_RS32785 WP_153180923.1 7300278..7300922(-) (clpP) [Streptomyces sp. SYP-A7193]
ATGACCCGACCGTCCGCCCGCCATGTCCTGCCCGGGTTCACCGAGCGCACGAGCGCCGGGGCCCGGACGACGGATCCCTA
CTCCGAGTTGCTCCGGGAGCGGATCGTCTTCCTCGGGACACCGGTCGACGAGACCTCCGCGAACGACGTGACGGCGCAGT
TCATGTACCTGGAGCACCAGGCGCCGGACCGGGACATCGAGTTGTACGTCAACTCGCCCGGCGGCTCCTTCACCGCGATG
ACGGCGATCTACGACACGATGCGCCACGTCGCCTGCGACGTGGCGACGACCTGCCTCGGGCAGGCCGGTTCGTCCGCCGC
GGTGCTGCTGGCGGCGGGCACCCCGGGCAAGCGCGCCGTACTGCCGGGCGCCCGGGTGGTGCTCCACCAGCCGGCGCCGA
CCGAACCGCTGGAGGGACCGGCGAACGACCTGGCCGTCCGCGCCGCCGAACTGCTCCGCGCCCGCGCCCGCCTGGAGGAG
ATCCTCGTACGGCACACGGGCCGCAGCCCCGGACAAGTGCACGCGGACATCGAGCGGGACACCGTCCTGGACGCCCAACA
GGCGCTGGCGTACGGCCTGGTGGACCGGATCGTGGCGGACCGCAGGGCGTCGTCCGTCCCCTCCTCGGCGCCCGGCGCGA
GGTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (20-199)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pneumoniae Rx1	43.005	90.187	0.388
clpP	Streptococcus pneumoniae D39	43.005	90.187	0.388
clpP	Streptococcus pneumoniae R6	43.005	90.187	0.388
clpP	Streptococcus pneumoniae TIGR4	43.005	90.187	0.388
clpP	Streptococcus pyogenes JRS4	42.487	90.187	0.383
clpP	Streptococcus pyogenes MGAS315	42.487	90.187	0.383
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	41.237	90.654	0.374
clpP	Lactococcus lactis subsp. cremoris KW2	41.237	90.654	0.374
clpP	Streptococcus mutans UA159	39.303	93.925	0.369
clpP	Bacillus subtilis subsp. subtilis str. 168	40.838	89.252	0.364
clpP	Streptococcus thermophilus LMG 18311	40.206	90.654	0.364
clpP	Streptococcus thermophilus LMD-9	40.206	90.654	0.364