Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | EPB59_RS00405 | Genome accession | NZ_CP035686 |
| Coordinates | 88438..89028 (+) | Length | 196 a.a. |
| NCBI ID | WP_000135851.1 | Uniprot ID | A0A067BH58 |
| Organism | Vibrio metoecus strain 2011V-1169 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 83438..94028
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EPB59_RS00390 | - | 84243..86719 (-) | 2477 | Protein_77 | penicillin-binding protein 1A | - |
| EPB59_RS00395 | pilM | 86861..87877 (+) | 1017 | WP_055029205.1 | type IV pilus assembly protein PilM | Machinery gene |
| EPB59_RS00400 | pilN | 87867..88445 (+) | 579 | WP_055029206.1 | PilN domain-containing protein | Machinery gene |
| EPB59_RS00405 | pilO | 88438..89028 (+) | 591 | WP_000135851.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| EPB59_RS00410 | pilP | 89018..89536 (+) | 519 | WP_000794742.1 | pilus assembly protein PilP | Machinery gene |
| EPB59_RS00415 | pilQ | 89562..91277 (+) | 1716 | WP_055033430.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| EPB59_RS00420 | aroK | 91464..91988 (+) | 525 | WP_000818614.1 | shikimate kinase AroK | - |
| EPB59_RS00425 | aroB | 92016..93101 (+) | 1086 | WP_195707019.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 22853.18 Da Isoelectric Point: 4.3574
>NTDB_id=343632 EPB59_RS00405 WP_000135851.1 88438..89028(+) (pilO) [Vibrio metoecus strain 2011V-1169]
MASFQELELDEMAEWPVLPQLLVILLLMLLVQGAGYWFYLMPKQDEIAALKQEEETVKATLRIKANKVAALPQIQAQLDE
LNERYDFLLRQLPVQKELASMLASVNQLGLDNSLTFTRIDWGERQAQEFLYRLPLNIELTGNYHDIGDFSEAIAKLPRII
NFDDIDWQRVSQESSTLHFRVKAYTYQFKQEVEDEK
MASFQELELDEMAEWPVLPQLLVILLLMLLVQGAGYWFYLMPKQDEIAALKQEEETVKATLRIKANKVAALPQIQAQLDE
LNERYDFLLRQLPVQKELASMLASVNQLGLDNSLTFTRIDWGERQAQEFLYRLPLNIELTGNYHDIGDFSEAIAKLPRII
NFDDIDWQRVSQESSTLHFRVKAYTYQFKQEVEDEK
Nucleotide
Download Length: 591 bp
>NTDB_id=343632 EPB59_RS00405 WP_000135851.1 88438..89028(+) (pilO) [Vibrio metoecus strain 2011V-1169]
ATGGCTAGTTTTCAAGAGTTAGAACTGGACGAAATGGCAGAATGGCCGGTGTTACCCCAATTGCTGGTGATCTTGCTGCT
GATGCTATTGGTGCAAGGCGCAGGATACTGGTTTTATCTGATGCCCAAACAAGATGAGATCGCAGCACTCAAGCAGGAGG
AAGAAACCGTCAAAGCCACGTTACGCATCAAAGCAAACAAAGTGGCTGCTTTGCCGCAGATCCAAGCTCAATTGGATGAA
TTGAACGAGCGCTACGATTTTTTACTACGCCAACTGCCTGTGCAAAAAGAGCTAGCCAGTATGCTGGCATCAGTAAACCA
ACTTGGTCTGGATAATTCACTGACATTTACTCGGATTGATTGGGGGGAGCGTCAAGCTCAAGAGTTTTTGTATCGCCTTC
CACTCAATATTGAACTGACCGGGAATTACCACGATATCGGAGATTTCTCTGAGGCAATCGCGAAGTTACCGCGCATTATC
AACTTCGATGACATCGATTGGCAGCGGGTCAGCCAAGAAAGTAGCACGCTGCATTTTCGGGTAAAAGCTTACACCTATCA
GTTTAAGCAGGAGGTGGAAGATGAAAAATAA
ATGGCTAGTTTTCAAGAGTTAGAACTGGACGAAATGGCAGAATGGCCGGTGTTACCCCAATTGCTGGTGATCTTGCTGCT
GATGCTATTGGTGCAAGGCGCAGGATACTGGTTTTATCTGATGCCCAAACAAGATGAGATCGCAGCACTCAAGCAGGAGG
AAGAAACCGTCAAAGCCACGTTACGCATCAAAGCAAACAAAGTGGCTGCTTTGCCGCAGATCCAAGCTCAATTGGATGAA
TTGAACGAGCGCTACGATTTTTTACTACGCCAACTGCCTGTGCAAAAAGAGCTAGCCAGTATGCTGGCATCAGTAAACCA
ACTTGGTCTGGATAATTCACTGACATTTACTCGGATTGATTGGGGGGAGCGTCAAGCTCAAGAGTTTTTGTATCGCCTTC
CACTCAATATTGAACTGACCGGGAATTACCACGATATCGGAGATTTCTCTGAGGCAATCGCGAAGTTACCGCGCATTATC
AACTTCGATGACATCGATTGGCAGCGGGTCAGCCAAGAAAGTAGCACGCTGCATTTTCGGGTAAAAGCTTACACCTATCA
GTTTAAGCAGGAGGTGGAAGATGAAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Vibrio cholerae strain A1552 |
90.816 |
100 |
0.908 |
| pilO | Vibrio campbellii strain DS40M4 |
68.783 |
96.429 |
0.663 |