Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   ETT51_RS05230 Genome accession   NZ_CP035448
Coordinates   990929..991765 (+) Length   278 a.a.
NCBI ID   WP_002995009.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm70     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 985929..996765
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT51_RS05200 (ETT51_05255) - 986480..986854 (+) 375 WP_063632495.1 hypothetical protein -
  ETT51_RS05205 (ETT51_05260) - 986901..987812 (-) 912 WP_023610321.1 diacylglycerol/lipid kinase family protein -
  ETT51_RS05210 (ETT51_05265) trhA 987929..988579 (-) 651 WP_002984629.1 PAQR family membrane homeostasis protein TrhA -
  ETT51_RS05215 (ETT51_05270) - 988576..989016 (-) 441 WP_002989774.1 DUF1836 domain-containing protein -
  ETT51_RS05220 (ETT51_05275) ylqF 989235..990083 (+) 849 WP_063632496.1 ribosome biogenesis GTPase YlqF -
  ETT51_RS05225 (ETT51_05280) - 990073..990864 (+) 792 WP_023611055.1 ribonuclease HII -
  ETT51_RS05230 (ETT51_05285) dprA 990929..991765 (+) 837 WP_002995009.1 DNA-processing protein DprA Machinery gene
  ETT51_RS05235 (ETT51_05290) topA 991872..994001 (+) 2130 WP_063632497.1 type I DNA topoisomerase -
  ETT51_RS05240 (ETT51_05295) trmFO 994136..995482 (+) 1347 WP_002995015.1 methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO -

Sequence


Protein


Download         Length: 278 a.a.        Molecular weight: 30970.91 Da        Isoelectric Point: 8.8230

>NTDB_id=342136 ETT51_RS05230 WP_002995009.1 990929..991765(+) (dprA) [Streptococcus pyogenes strain emm70]
MNHFELYKLKKAGLTNKNILNILDYQEHQEKSLSLRDMAVVSGCKHPSHFIEAYKQLDIQKLKIEFKQFPSISILDKHYP
MALKEIYNPPVLLFFQGNLDLLEKPKLAIVGSRRSSDTGVKSVRKILKELGNRFVIVSGLARGIDTSAHLACLKNGGQTI
AIIGTGLDRFYPKENRELQTFLGKNHLVLTEYGPGEEALSYHFPERNRIIAGLSRGILVVEAKNRSGSLITCQIGIEEGR
DIFAVPGNILDGKSEGCLQLIKEGATCVTSGMDILSEY

Nucleotide


Download         Length: 837 bp        

>NTDB_id=342136 ETT51_RS05230 WP_002995009.1 990929..991765(+) (dprA) [Streptococcus pyogenes strain emm70]
GTGAATCATTTTGAACTTTATAAGCTAAAGAAAGCTGGACTGACTAATAAAAACATTCTCAATATTCTTGACTACCAAGA
ACACCAGGAAAAATCGTTGTCACTTCGAGATATGGCCGTTGTTTCTGGTTGTAAGCATCCGTCTCACTTTATAGAAGCCT
ATAAGCAGTTAGATATTCAAAAATTAAAAATAGAATTTAAACAATTTCCTAGTATTTCTATCTTAGATAAGCATTACCCA
ATGGCATTGAAAGAAATATACAATCCACCTGTCCTCTTGTTTTTTCAGGGAAATTTAGACCTTCTTGAGAAACCTAAATT
AGCCATTGTCGGCTCCAGACGCTCAAGCGATACCGGAGTAAAGTCTGTCCGTAAAATTCTTAAAGAACTCGGGAACCGTT
TTGTGATTGTTAGCGGACTTGCTCGAGGTATCGACACTAGTGCTCATTTAGCCTGCCTTAAAAATGGGGGACAAACCATC
GCTATTATTGGAACAGGGTTGGATCGCTTTTACCCTAAAGAAAATAGGGAGTTGCAAACTTTCTTAGGGAAAAATCATCT
TGTGCTAACAGAATACGGTCCAGGAGAAGAAGCTTTATCTTATCACTTTCCAGAACGGAATCGTATTATCGCAGGCCTTA
GCCGAGGTATACTTGTCGTTGAAGCAAAAAATCGTTCAGGTTCCTTGATTACTTGTCAAATTGGGATAGAAGAAGGCCGA
GACATTTTTGCTGTCCCAGGAAACATTTTGGACGGGAAATCCGAAGGTTGCCTTCAGTTAATTAAAGAGGGAGCAACATG
CGTCACATCGGGCATGGATATCCTTTCAGAGTACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Streptococcus mutans UA159

67.626

100

0.676

  dprA/cilB/dalA Streptococcus pneumoniae Rx1

60.791

100

0.608

  dprA/cilB/dalA Streptococcus pneumoniae D39

60.791

100

0.608

  dprA/cilB/dalA Streptococcus pneumoniae R6

60.791

100

0.608

  dprA/cilB/dalA Streptococcus pneumoniae TIGR4

60.791

100

0.608

  dprA/cilB/dalA Streptococcus mitis SK321

60.791

100

0.608

  dprA/cilB/dalA Streptococcus mitis NCTC 12261

60.432

100

0.604

  dprA Lactococcus lactis subsp. cremoris KW2

57.554

100

0.576

  dprA Legionella pneumophila strain ERS1305867

42.857

85.612

0.367


Multiple sequence alignment