Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   ETT61_RS04610 Genome accession   NZ_CP035438
Coordinates   856801..857637 (-) Length   278 a.a.
NCBI ID   WP_111693218.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm22.8     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 851801..862637
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT61_RS04585 (ETT61_04575) - 852097..853090 (-) 994 Protein_841 D-lactate dehydrogenase -
  ETT61_RS04590 (ETT61_04580) - 853105..853671 (-) 567 Protein_842 PTS sugar transporter subunit IIC -
  ETT61_RS10140 - 853711..854490 (+) 780 Protein_843 LysR family transcriptional regulator -
  ETT61_RS04605 (ETT61_04595) topA 854565..856694 (-) 2130 WP_136019835.1 type I DNA topoisomerase -
  ETT61_RS04610 (ETT61_04600) dprA 856801..857637 (-) 837 WP_111693218.1 DNA-processing protein DprA Machinery gene
  ETT61_RS04615 (ETT61_04605) - 857702..858493 (-) 792 WP_136019834.1 ribonuclease HII -
  ETT61_RS04620 (ETT61_04610) ylqF 858483..859331 (-) 849 WP_136019833.1 ribosome biogenesis GTPase YlqF -
  ETT61_RS04625 (ETT61_04615) - 859550..859990 (+) 441 WP_002989774.1 DUF1836 domain-containing protein -
  ETT61_RS04630 (ETT61_04620) - 859987..860637 (+) 651 WP_002984629.1 hemolysin III family protein -
  ETT61_RS04635 (ETT61_04625) - 860754..861665 (+) 912 WP_136019832.1 diacylglycerol kinase family protein -
  ETT61_RS04640 (ETT61_04630) - 861715..862083 (-) 369 WP_010922310.1 hypothetical protein -

Sequence


Protein


Download         Length: 278 a.a.        Molecular weight: 31073.07 Da        Isoelectric Point: 9.2565

>NTDB_id=341595 ETT61_RS04610 WP_111693218.1 856801..857637(-) (dprA) [Streptococcus pyogenes strain emm22.8]
MNHFELYKLKKAGLTNKNILNILDYQKHQEKSLSLRDMAVVSGCKHPSHFIEAYKQLDIQNLKMEFKQFPSISILDKHYP
MALKEIYNPPVLLFFQGNLDLLEKPKLAIVGSRRSSDTGVKSVRKILKELGNRFVIVSGLARGIDTSAHLACLKNGGQTI
AIIGTGLDRFYPKENRELQTFLGKNHLVLTEYGPREEALSYHFPERNRIIAGLSRGILVVEAKNRSGSLITCQIGIEEGR
DIFAVPGNILDGKSEGCLQLIKEGATCVTSGMDILSEY

Nucleotide


Download         Length: 837 bp        

>NTDB_id=341595 ETT61_RS04610 WP_111693218.1 856801..857637(-) (dprA) [Streptococcus pyogenes strain emm22.8]
GTGAATCATTTTGAACTTTATAAGCTAAAGAAAGCTGGACTGACTAATAAAAACATTCTCAATATTCTTGACTACCAAAA
ACACCAGGAAAAATCGTTGTCACTTCGAGATATGGCCGTTGTTTCTGGTTGTAAGCATCCGTCTCACTTTATAGAAGCCT
ATAAGCAGTTAGATATTCAAAATTTAAAAATGGAATTTAAACAATTTCCTAGTATTTCTATCTTAGATAAGCATTACCCA
ATGGCATTGAAAGAAATATACAATCCACCTGTCCTCTTGTTTTTTCAGGGAAATTTAGACCTTCTTGAGAAACCTAAATT
AGCCATTGTCGGCTCCAGACGCTCAAGCGATACCGGAGTAAAGTCTGTCCGTAAAATTCTTAAAGAACTCGGGAACCGTT
TTGTGATTGTTAGCGGACTTGCTCGAGGTATCGACACTAGTGCTCATTTAGCCTGCCTTAAAAATGGGGGACAAACCATC
GCTATTATTGGAACAGGGTTGGATCGCTTTTACCCTAAAGAAAATAGGGAGTTGCAAACTTTCTTAGGGAAAAATCATCT
TGTGCTAACAGAATACGGTCCAAGAGAAGAAGCTTTATCTTATCACTTTCCAGAACGGAATCGTATTATCGCAGGCCTTA
GCCGAGGTATTCTTGTCGTTGAAGCAAAAAATCGTTCAGGTTCCTTGATTACTTGTCAAATTGGGATAGAAGAAGGCCGA
GACATTTTTGCTGTCCCAGGAAACATTTTGGACGGGAAATCCGAAGGTTGCCTTCAGTTAATTAAAGAGGGAGCAACATG
CGTCACATCGGGCATGGATATCCTTTCAGAGTACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Streptococcus mutans UA159

67.266

100

0.673

  dprA/cilB/dalA Streptococcus pneumoniae Rx1

60.072

100

0.601

  dprA/cilB/dalA Streptococcus pneumoniae D39

60.072

100

0.601

  dprA/cilB/dalA Streptococcus pneumoniae R6

60.072

100

0.601

  dprA/cilB/dalA Streptococcus pneumoniae TIGR4

60.072

100

0.601

  dprA/cilB/dalA Streptococcus mitis SK321

60.072

100

0.601

  dprA/cilB/dalA Streptococcus mitis NCTC 12261

59.712

100

0.597

  dprA Lactococcus lactis subsp. cremoris KW2

56.835

100

0.568

  dprA Legionella pneumophila strain ERS1305867

42.857

85.612

0.367


Multiple sequence alignment