Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   ETT63_RS08640 Genome accession   NZ_CP035436
Coordinates   1707068..1707781 (+) Length   237 a.a.
NCBI ID   WP_002992823.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm89.14     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1702068..1712781
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT63_RS08630 (ETT63_08625) treC 1703138..1704766 (-) 1629 WP_136267862.1 alpha,alpha-phosphotrehalase -
  ETT63_RS08635 (ETT63_08630) treP 1704833..1706857 (-) 2025 WP_136267863.1 PTS system trehalose-specific EIIBC component -
  ETT63_RS08640 (ETT63_08635) treR 1707068..1707781 (+) 714 WP_002992823.1 trehalose operon repressor Regulator
  ETT63_RS08650 (ETT63_08645) - 1708060..1708398 (-) 339 Protein_1598 winged helix-turn-helix transcriptional regulator -
  ETT63_RS08655 (ETT63_08650) - 1708584..1709441 (+) 858 WP_111685291.1 VOC family protein -
  ETT63_RS08660 (ETT63_08655) yaaA 1709483..1710214 (+) 732 WP_111705297.1 peroxide stress protein YaaA -
  ETT63_RS08665 (ETT63_08660) nrdG 1710388..1711002 (-) 615 WP_002982219.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  ETT63_RS08670 (ETT63_08665) - 1711002..1711511 (-) 510 WP_136267864.1 GNAT family N-acetyltransferase -
  ETT63_RS08675 (ETT63_08670) - 1711520..1712455 (-) 936 WP_111676876.1 Gfo/Idh/MocA family protein -
  ETT63_RS09255 - 1712484..1712630 (-) 147 WP_011106921.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27620.79 Da        Isoelectric Point: 9.6307

>NTDB_id=341505 ETT63_RS08640 WP_002992823.1 1707068..1707781(+) (treR) [Streptococcus pyogenes strain emm89.14]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIRHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=341505 ETT63_RS08640 WP_002992823.1 1707068..1707781(+) (treR) [Streptococcus pyogenes strain emm89.14]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAGACATCATCAGATTATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.376

98.734

0.675

Multiple sequence alignment