Detailed information    

insolico Bioinformatically predicted

Overview


Name   comA/nlmT   Type   Regulator
Locus tag   ETT71_RS02445 Genome accession   NZ_CP035428
Coordinates   438906..441059 (-) Length   717 a.a.
NCBI ID   WP_129284363.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emmSTG866.1     
Function   transport of ComC (predicted from homology)   
Competence regulation

Genomic Context


Location: 433906..446059
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT71_RS02415 (ETT71_02415) - 434146..434368 (+) 223 Protein_420 Blp family class II bacteriocin -
  ETT71_RS02420 (ETT71_02420) - 434368..434862 (+) 495 Protein_421 transposase -
  ETT71_RS02425 (ETT71_02425) comE/blpR 435096..435845 (+) 750 WP_030126108.1 response regulator transcription factor Regulator
  ETT71_RS02430 (ETT71_02430) - 435846..437180 (+) 1335 WP_063631787.1 sensor histidine kinase -
  ETT71_RS02435 (ETT71_02435) - 437329..437454 (-) 126 WP_011017462.1 ComC/BlpC family leader-containing pheromone/bacteriocin -
  ETT71_RS02440 (ETT71_02440) - 437531..438895 (-) 1365 WP_136046694.1 bacteriocin secretion accessory protein -
  ETT71_RS02445 (ETT71_02445) comA/nlmT 438906..441059 (-) 2154 WP_129284363.1 peptide cleavage/export ABC transporter Regulator
  ETT71_RS02450 (ETT71_02450) - 441340..441564 (+) 225 WP_030126106.1 Blp family class II bacteriocin -
  ETT71_RS02455 (ETT71_02455) - 441641..441859 (+) 219 WP_030126105.1 bacteriocin -
  ETT71_RS02465 (ETT71_02465) - 442385..442795 (+) 411 WP_003061293.1 hypothetical protein -
  ETT71_RS09415 (ETT71_02470) - 443037..444106 (+) 1070 Protein_430 hypothetical protein -
  ETT71_RS02475 (ETT71_02475) - 444199..444597 (+) 399 WP_011054254.1 hypothetical protein -
  ETT71_RS02480 (ETT71_02480) stcA 444945..445214 (-) 270 WP_136093496.1 quorum-sensing system protein StcA -
  ETT71_RS09160 - 445609..445788 (-) 180 WP_011184266.1 hypothetical protein -
  ETT71_RS09420 (ETT71_02485) - 445737..445979 (-) 243 WP_002985713.1 hypothetical protein -

Sequence


Protein


Download         Length: 717 a.a.        Molecular weight: 80562.50 Da        Isoelectric Point: 7.0109

>NTDB_id=341053 ETT71_RS02445 WP_129284363.1 438906..441059(-) (comA/nlmT) [Streptococcus pyogenes strain emmSTG866.1]
MISYRKTFVAQIDARDCGVAALASIAKYYGSDYSLAHLRELAKTNKEGTTALGIVKAAKLMGFETRAIQADMTLFDIEDV
PYPFIVHVNKEGKFQHYYVIYQNKKNYLIIGDPDSTVKVTKMTKERFTSEWTGVAIFLAPEPSYKPHKDKKNGLISFLPL
IFKQRSLIFYIILASLLVTLINIVGSYYLQGILDDYIPNQLKSTLGIISIGLIITYILQQMMSFSRDYLLTVLSQRLSID
VILSYIRHIFELPMSFFATRRTGEIISRFTDANAIIDALASTILSLFLDVSILTIVGTVLLVQNTNLFLLSLVSVPLYIV
IIFIFMHPFEKMNNDVMQSNSMVSSAIIEDINGIETIKSLTSEENRYQKIDSEFVDYLDKSFKLSKYSILQSSLKQGAQL
ILNVIVLWFGAKLVMGGKISVGQLITFNTLLSYFTNPLENIINLQTKLQSAKVANNRLNEVYLVDSEFQEAGTLVNQELL
HGDIQFEELSYKYGFGRDTLSNINLTIKQGDKVSLVGISGSGKTTLAKMIVNFFEPYNGRITINHNDLKMIDKKSLRQHI
NYLPQQAYIFNGSILENLTLGANDCTSHEDILRACEVAEIRQDIEQMPMGYQTELSDGAGLSGGQKQRIALARALLTKAP
VLILDEATSGLDVLTEKRVIDNLLAMTDKTIIFVAHRLSISARTNQVIVLDEGKIIEIGSHQELMTKQGFYHHLFSS

Nucleotide


Download         Length: 2154 bp        

>NTDB_id=341053 ETT71_RS02445 WP_129284363.1 438906..441059(-) (comA/nlmT) [Streptococcus pyogenes strain emmSTG866.1]
ATGATATCCTATCGAAAAACATTTGTTGCTCAGATTGATGCTAGAGACTGTGGTGTGGCTGCTCTTGCTTCCATCGCTAA
ATATTACGGTTCAGACTACTCTTTAGCTCATTTAAGAGAGTTAGCTAAAACAAATAAAGAGGGAACAACAGCGCTTGGAA
TCGTCAAAGCTGCCAAATTAATGGGGTTTGAAACAAGAGCTATTCAAGCAGACATGACCCTCTTTGATATAGAAGATGTC
CCTTATCCTTTTATTGTTCATGTTAATAAAGAAGGTAAATTCCAACACTACTATGTCATCTATCAAAACAAAAAAAATTA
TCTGATAATCGGCGACCCTGACTCGACAGTAAAAGTCACTAAGATGACAAAGGAGCGATTTACTTCTGAATGGACGGGTG
TCGCTATTTTTCTAGCACCCGAGCCCAGCTACAAGCCTCATAAGGACAAAAAGAACGGTCTAATAAGCTTTTTACCTCTC
ATTTTTAAACAGCGATCTCTGATTTTCTATATCATATTAGCTAGCCTACTCGTTACTCTGATTAATATTGTAGGTTCTTA
TTACCTACAAGGTATATTAGATGACTATATTCCAAATCAACTGAAATCAACACTCGGCATTATTTCAATTGGTCTTATCA
TTACCTATATCCTCCAACAGATGATGAGTTTTTCGCGAGATTATCTCCTGACTGTACTGAGTCAGCGATTAAGCATTGAT
GTTATTTTATCCTATATTCGTCATATTTTTGAGCTTCCCATGTCTTTCTTTGCAACACGTCGGACAGGAGAAATCATCTC
ACGTTTTACAGATGCTAATGCTATTATTGATGCACTCGCTTCTACTATTTTGTCTCTTTTTCTTGATGTCAGTATTTTAA
CTATCGTAGGGACAGTCCTGTTAGTGCAAAATACCAATCTTTTTCTTCTATCTCTGGTTTCAGTCCCTCTATATATTGTT
ATTATCTTTATATTTATGCACCCATTTGAAAAGATGAATAATGATGTCATGCAGAGTAACTCTATGGTTAGCTCAGCCAT
TATCGAAGATATCAATGGCATTGAAACTATTAAATCACTGACCAGTGAAGAAAATCGTTATCAGAAAATTGATAGTGAAT
TTGTGGACTATCTGGATAAATCCTTCAAGTTAAGTAAGTACTCTATTTTACAAAGCAGTCTCAAACAAGGGGCGCAACTA
ATCCTTAACGTGATAGTCTTATGGTTTGGGGCCAAATTAGTTATGGGAGGAAAAATTTCTGTTGGTCAGTTGATTACGTT
TAATACTCTCTTATCTTATTTTACCAATCCTTTAGAAAATATCATTAATCTTCAAACTAAACTGCAATCAGCCAAGGTAG
CTAATAATCGTCTCAATGAAGTTTACCTAGTCGATTCTGAGTTTCAAGAGGCTGGGACATTAGTCAATCAAGAATTATTA
CACGGAGACATTCAATTTGAAGAGTTATCCTATAAATATGGCTTTGGACGCGATACTCTATCAAATATTAATCTCACTAT
TAAGCAAGGGGACAAAGTTAGCCTTGTTGGTATTAGTGGATCTGGTAAAACGACTCTAGCTAAAATGATTGTTAATTTTT
TTGAGCCTTATAACGGCCGAATTACCATTAATCATAATGACTTAAAAATGATTGATAAAAAAAGTCTTCGCCAACATATT
AATTATCTCCCCCAACAAGCCTATATTTTTAATGGTTCTATTTTAGAAAATTTAACCTTAGGTGCTAATGACTGTACTAG
TCATGAAGATATTCTAAGAGCTTGTGAGGTTGCAGAAATTCGACAAGATATTGAACAAATGCCTATGGGCTATCAAACAG
AGCTTTCTGATGGTGCCGGACTCTCAGGAGGCCAAAAGCAACGAATTGCACTTGCCAGAGCTCTCCTAACCAAGGCGCCT
GTGCTTATTCTAGATGAGGCTACAAGCGGTCTTGACGTACTAACTGAAAAGAGGGTTATTGATAATCTTTTGGCTATGAC
GGATAAAACTATTATTTTCGTAGCTCATCGTCTCAGCATTTCAGCGCGGACCAATCAAGTCATTGTGCTTGATGAGGGTA
AAATTATTGAAATAGGATCTCATCAAGAATTAATGACTAAACAAGGTTTCTATCATCATTTATTTAGTAGTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/nlmT Streptococcus mutans UA159

72.587

99.721

0.724

  comA Streptococcus mitis NCTC 12261

67.367

99.582

0.671

  comA Streptococcus mitis SK321

66.947

99.582

0.667

  comA Streptococcus pneumoniae Rx1

66.947

99.582

0.667

  comA Streptococcus pneumoniae D39

66.947

99.582

0.667

  comA Streptococcus pneumoniae R6

66.947

99.582

0.667

  comA Streptococcus pneumoniae TIGR4

66.667

99.582

0.664

  comA Streptococcus gordonii str. Challis substr. CH1

65.738

100

0.658


Multiple sequence alignment