Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ES963_RS04600 Genome accession   NZ_CP035390
Coordinates   895143..895937 (+) Length   264 a.a.
NCBI ID   WP_029726844.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103641     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 890143..900937
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ES963_RS04570 (ES963_04570) sxzA 890983..892014 (+) 1032 WP_087614454.1 iron ABC transporter permease -
  ES963_RS04575 (ES963_04575) yfhB 892128..893009 (+) 882 WP_014479213.1 PhzF family phenazine biosynthesis isomerase -
  ES963_RS04580 (ES963_04580) yfhC 893097..893681 (+) 585 WP_032723010.1 nitroreductase -
  ES963_RS04585 (ES963_04585) yfhD 893720..893911 (-) 192 WP_003233561.1 YfhD family protein -
  ES963_RS04590 (ES963_04590) yfhE 893978..894088 (-) 111 WP_003223230.1 YfhE family protein -
  ES963_RS04595 (ES963_04595) yfhF 894143..895054 (-) 912 WP_129092954.1 TIGR01777 family oxidoreductase -
  ES963_RS04600 (ES963_04600) recX 895143..895937 (+) 795 WP_029726844.1 recombination regulator RecX Regulator
  ES963_RS04605 (ES963_04605) yfhH 895939..896253 (+) 315 WP_003244592.1 YfhH family protein -
  ES963_RS04610 (ES963_04610) yfhI 896396..897589 (+) 1194 WP_003243500.1 MFS transporter -
  ES963_RS04615 (ES963_04615) sspK 897621..897773 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  ES963_RS04620 (ES963_04620) yfhJ 897898..898167 (+) 270 WP_015252516.1 YfhJ family protein -
  ES963_RS04625 (ES963_04625) yfhK 898312..898830 (+) 519 WP_129092955.1 SH3 domain-containing protein -
  ES963_RS04630 (ES963_04630) spdL 898915..899247 (+) 333 WP_003242803.1 SdpC immunity protein SpdL -
  ES963_RS04635 (ES963_04635) ephM 899234..900094 (+) 861 WP_076458543.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31047.25 Da        Isoelectric Point: 6.6686

>NTDB_id=339514 ES963_RS04600 WP_029726844.1 895143..895937(+) (recX) [Bacillus subtilis strain SRCM103641]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=339514 ES963_RS04600 WP_029726844.1 895143..895937(+) (recX) [Bacillus subtilis strain SRCM103641]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTTTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996

Multiple sequence alignment