Detailed information
Bioinformatically predicted
Overview
| Name | comA/nlmT | Type | Regulator |
| Locus tag | EQH22_RS10970 | Genome accession | NZ_CP035258 |
| Coordinates | 486747..487658 (-) | Length | 303 a.a. |
| NCBI ID | WP_001828567.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain TVO_1901927 | ||
| Function | transport of ComC (predicted from homology) Competence regulation |
||
Genomic Context
Location: 481747..492658
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQH22_RS02445 (EQH22_02605) | - | 482081..482410 (-) | 330 | WP_000132575.1 | hypothetical protein | - |
| EQH22_RS02450 (EQH22_02610) | - | 482686..483024 (+) | 339 | WP_000682120.1 | LytTR family DNA-binding domain-containing protein | - |
| EQH22_RS02455 (EQH22_02615) | comE/blpR | 483029..483766 (+) | 738 | WP_001219121.1 | response regulator transcription factor | Regulator |
| EQH22_RS02460 (EQH22_02620) | - | 483780..485118 (+) | 1339 | Protein_492 | sensor histidine kinase | - |
| EQH22_RS02465 (EQH22_02625) | blpC | 485163..485318 (-) | 156 | WP_000358810.1 | quorum-sensing system pheromone BlpC | - |
| EQH22_RS02470 (EQH22_02630) | - | 485375..486736 (-) | 1362 | WP_001069085.1 | bacteriocin secretion accessory protein | - |
| EQH22_RS10970 | comA/nlmT | 486747..487658 (-) | 912 | WP_001828567.1 | ATP-binding cassette domain-containing protein | Regulator |
| EQH22_RS10975 | blpA | 487647..488371 (-) | 725 | Protein_496 | peptide cleavage/export ABC transporter BlpA | - |
| EQH22_RS10980 (EQH22_02640) | comA/nlmT | 488316..488903 (-) | 588 | WP_001810858.1 | cysteine peptidase family C39 domain-containing protein | Regulator |
| EQH22_RS02480 (EQH22_02645) | blpI | 489185..489382 (+) | 198 | WP_001093259.1 | bacteriocin-like peptide BlpI | - |
| EQH22_RS02485 (EQH22_02655) | blpJ | 489849..490118 (+) | 270 | WP_001093248.1 | bacteriocin-like peptide BlpJ | - |
| EQH22_RS02490 (EQH22_02660) | blpU | 490187..490417 (+) | 231 | WP_000379964.1 | bacteriocin-like peptide BlpU | - |
| EQH22_RS02495 (EQH22_02665) | - | 490420..490539 (+) | 120 | WP_000346298.1 | PncF family bacteriocin immunity protein | - |
| EQH22_RS02500 (EQH22_02675) | - | 491059..491377 (+) | 319 | Protein_502 | immunity protein | - |
| EQH22_RS02505 (EQH22_02680) | - | 491460..491843 (+) | 384 | WP_000877381.1 | hypothetical protein | - |
| EQH22_RS02510 (EQH22_02685) | - | 491895..492584 (+) | 690 | WP_000760515.1 | CPBP family intramembrane glutamic endopeptidase | - |
Sequence
Protein
Download Length: 303 a.a. Molecular weight: 34066.15 Da Isoelectric Point: 7.0330
>NTDB_id=338201 EQH22_RS10970 WP_001828567.1 486747..487658(-) (comA/nlmT) [Streptococcus pneumoniae strain TVO_1901927]
MSSKISIGQLITFNTLFSYFTTPMENIINLQTKLQSAKVANNRLNEVYLVESEFQVQENPVHSHFLMGDIEFDDLSYKYG
FGRDTLTDINLTIKQGDKVSLVGVSGSGKTTLAKMIVNFFEPYKGHISINHQDIKNIDKKVLRRHINYLPQQAYIFNGSI
LENLTLGGNHMISQEDILKACELAEIRQDIERMPMGYQTQLSDGAGLSGGQKQRIALARALLTKAPVLILDEATSGLDVL
TEKKVIDNLISLTDKTILFVAHRLSIAERTNRVIVLDQGKIIEVGSHQELMQAQGFYHHLFNK
MSSKISIGQLITFNTLFSYFTTPMENIINLQTKLQSAKVANNRLNEVYLVESEFQVQENPVHSHFLMGDIEFDDLSYKYG
FGRDTLTDINLTIKQGDKVSLVGVSGSGKTTLAKMIVNFFEPYKGHISINHQDIKNIDKKVLRRHINYLPQQAYIFNGSI
LENLTLGGNHMISQEDILKACELAEIRQDIERMPMGYQTQLSDGAGLSGGQKQRIALARALLTKAPVLILDEATSGLDVL
TEKKVIDNLISLTDKTILFVAHRLSIAERTNRVIVLDQGKIIEVGSHQELMQAQGFYHHLFNK
Nucleotide
Download Length: 912 bp
>NTDB_id=338201 EQH22_RS10970 WP_001828567.1 486747..487658(-) (comA/nlmT) [Streptococcus pneumoniae strain TVO_1901927]
ATGTCAAGTAAAATTTCTATCGGTCAGCTGATTACCTTTAACACACTTTTTTCTTACTTTACAACTCCTATGGAAAATAT
TATCAACCTCCAAACCAAACTCCAATCTGCGAAGGTCGCTAATAACCGTTTGAACGAAGTCTATCTAGTCGAATCTGAAT
TTCAAGTTCAAGAAAACCCTGTTCATTCACATTTTTTGATGGGCGATATTGAATTTGATGACCTTTCTTATAAGTATGGT
TTTGGACGAGATACCTTAACAGATATTAATCTCACGATTAAACAAGGAGATAAGGTTAGCCTAGTTGGAGTTAGTGGTTC
TGGTAAAACAACTTTAGCCAAAATGATTGTCAATTTCTTTGAACCCTACAAAGGGCATATTTCCATCAATCATCAGGATA
TTAAAAACATTGATAAAAAAGTCTTGCGCCGTCATATTAATTACCTACCCCAACAAGCCTATATCTTTAATGGCTCTATT
TTGGAAAACTTAACCTTGGGCGGTAATCATATGATTAGCCAAGAAGATATTCTAAAAGCTTGTGAATTAGCTGAAATTCG
TCAAGACATTGAAAGAATGCCTATGGGCTATCAAACTCAGCTCTCTGATGGAGCTGGTCTATCAGGAGGACAAAAGCAAC
GAATCGCTCTCGCTCGTGCTCTTTTAACTAAAGCTCCTGTTTTAATACTAGATGAAGCTACTAGCGGTCTTGATGTCTTG
ACTGAGAAAAAGGTTATAGATAATCTTATATCCCTAACTGATAAAACCATTCTCTTTGTAGCCCATCGTCTCAGTATAGC
CGAACGAACTAACCGTGTCATTGTTCTTGACCAGGGGAAAATCATTGAAGTTGGTAGTCACCAAGAGTTAATGCAAGCGC
AAGGATTCTACCATCATCTATTCAATAAATAA
ATGTCAAGTAAAATTTCTATCGGTCAGCTGATTACCTTTAACACACTTTTTTCTTACTTTACAACTCCTATGGAAAATAT
TATCAACCTCCAAACCAAACTCCAATCTGCGAAGGTCGCTAATAACCGTTTGAACGAAGTCTATCTAGTCGAATCTGAAT
TTCAAGTTCAAGAAAACCCTGTTCATTCACATTTTTTGATGGGCGATATTGAATTTGATGACCTTTCTTATAAGTATGGT
TTTGGACGAGATACCTTAACAGATATTAATCTCACGATTAAACAAGGAGATAAGGTTAGCCTAGTTGGAGTTAGTGGTTC
TGGTAAAACAACTTTAGCCAAAATGATTGTCAATTTCTTTGAACCCTACAAAGGGCATATTTCCATCAATCATCAGGATA
TTAAAAACATTGATAAAAAAGTCTTGCGCCGTCATATTAATTACCTACCCCAACAAGCCTATATCTTTAATGGCTCTATT
TTGGAAAACTTAACCTTGGGCGGTAATCATATGATTAGCCAAGAAGATATTCTAAAAGCTTGTGAATTAGCTGAAATTCG
TCAAGACATTGAAAGAATGCCTATGGGCTATCAAACTCAGCTCTCTGATGGAGCTGGTCTATCAGGAGGACAAAAGCAAC
GAATCGCTCTCGCTCGTGCTCTTTTAACTAAAGCTCCTGTTTTAATACTAGATGAAGCTACTAGCGGTCTTGATGTCTTG
ACTGAGAAAAAGGTTATAGATAATCTTATATCCCTAACTGATAAAACCATTCTCTTTGTAGCCCATCGTCTCAGTATAGC
CGAACGAACTAACCGTGTCATTGTTCTTGACCAGGGGAAAATCATTGAAGTTGGTAGTCACCAAGAGTTAATGCAAGCGC
AAGGATTCTACCATCATCTATTCAATAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comA/nlmT | Streptococcus mutans UA159 |
71.854 |
99.67 |
0.716 |
| comA | Streptococcus pneumoniae Rx1 |
66.337 |
100 |
0.663 |
| comA | Streptococcus pneumoniae D39 |
66.337 |
100 |
0.663 |
| comA | Streptococcus pneumoniae R6 |
66.337 |
100 |
0.663 |
| comA | Streptococcus mitis NCTC 12261 |
66.337 |
100 |
0.663 |
| comA | Streptococcus pneumoniae TIGR4 |
66.007 |
100 |
0.66 |
| comA | Streptococcus gordonii str. Challis substr. CH1 |
65.789 |
100 |
0.66 |
| comA | Streptococcus mitis SK321 |
65.347 |
100 |
0.653 |