Detailed information
Bioinformatically predicted
Overview
| Name | treR | Type | Regulator |
| Locus tag | FTN78_RS07955 | Genome accession | NZ_CP043523 |
| Coordinates | 1540801..1541517 (+) | Length | 238 a.a. |
| NCBI ID | WP_003131538.1 | Uniprot ID | Q9CID8 |
| Organism | Lactococcus lactis subsp. lactis bv. diacetylactis strain SD96 | ||
| Function | regulate expression of competence genes (predicted from homology) Competence regulation |
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Genomic Context
Location: 1535801..1546517
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FTN78_RS07940 (FTN78_chr1573) | - | 1536126..1538435 (-) | 2310 | WP_010905330.1 | glycoside hydrolase family 65 protein | - |
| FTN78_RS07945 (FTN78_chr1574) | - | 1538503..1540068 (-) | 1566 | WP_021214847.1 | PTS transporter subunit EIIC | - |
| FTN78_RS07950 (FTN78_chr1575) | - | 1540205..1540690 (-) | 486 | WP_003131536.1 | PTS glucose transporter subunit IIA | - |
| FTN78_RS07955 (FTN78_chr1576) | treR | 1540801..1541517 (+) | 717 | WP_003131538.1 | trehalose operon repressor | Regulator |
| FTN78_RS07960 (FTN78_chr1577) | glmM | 1541593..1542951 (-) | 1359 | WP_003131539.1 | phosphoglucosamine mutase | - |
| FTN78_RS07965 (FTN78_chr1578) | - | 1542997..1543956 (-) | 960 | WP_012897245.1 | YbbR-like domain-containing protein | - |
| FTN78_RS07970 (FTN78_chr1579) | cdaA | 1543946..1544824 (-) | 879 | WP_003131542.1 | diadenylate cyclase CdaA | - |
Sequence
Protein
Download Length: 238 a.a. Molecular weight: 27865.52 Da Isoelectric Point: 6.4168
>NTDB_id=338039 FTN78_RS07955 WP_003131538.1 1540801..1541517(+) (treR) [Lactococcus lactis subsp. lactis bv. diacetylactis strain SD96]
MKKYEVILQDLEKKIFNDIYKTNDILPSENELSANYESSRSTVRQALKILEEKGLIQRRHGYGSIVLAHDRLLFPISGLT
SYKELQTSMGFHSETEVIRFERLEINPKLSETTGFAVGEHAISILRRRKVDGKFSILDWDLFLEKYSEGLTPEHAKISTY
DYLEDTLGLDIAYAQKEVTIDFACEDDFKYLDLNPKDHHVVSVKSHVYLADNTLFQYTESRHQVDRFRFTEFARRQKR
MKKYEVILQDLEKKIFNDIYKTNDILPSENELSANYESSRSTVRQALKILEEKGLIQRRHGYGSIVLAHDRLLFPISGLT
SYKELQTSMGFHSETEVIRFERLEINPKLSETTGFAVGEHAISILRRRKVDGKFSILDWDLFLEKYSEGLTPEHAKISTY
DYLEDTLGLDIAYAQKEVTIDFACEDDFKYLDLNPKDHHVVSVKSHVYLADNTLFQYTESRHQVDRFRFTEFARRQKR
Nucleotide
Download Length: 717 bp
>NTDB_id=338039 FTN78_RS07955 WP_003131538.1 1540801..1541517(+) (treR) [Lactococcus lactis subsp. lactis bv. diacetylactis strain SD96]
ATGAAGAAATATGAAGTGATTTTGCAAGATTTAGAAAAAAAGATTTTTAACGATATCTATAAAACGAACGATATTCTTCC
AAGTGAAAATGAGCTCTCTGCTAATTACGAGAGCAGTCGTTCAACAGTCAGACAGGCTTTAAAAATTTTAGAAGAGAAAG
GGCTTATTCAAAGACGACATGGCTATGGTAGCATTGTCCTCGCTCACGATAGGCTCCTTTTCCCTATCTCTGGCTTAACT
TCATACAAAGAACTACAAACCTCTATGGGTTTCCATAGTGAAACTGAGGTCATTCGATTTGAAAGACTTGAAATTAACCC
TAAACTTTCAGAAACAACTGGTTTTGCCGTTGGTGAACACGCCATAAGTATTCTCAGAAGGCGCAAAGTAGATGGCAAAT
TTTCAATTTTAGATTGGGATTTATTTTTAGAAAAATATTCCGAAGGTTTAACTCCAGAACATGCTAAAATTTCAACCTAT
GACTACTTAGAAGATACTCTAGGGCTTGATATTGCCTATGCTCAAAAGGAAGTCACGATTGATTTTGCCTGCGAAGATGA
CTTTAAATATCTTGACTTAAATCCCAAAGACCATCATGTCGTGTCTGTCAAATCTCATGTTTATCTTGCTGATAATACTC
TTTTTCAGTATACTGAATCTCGACATCAAGTCGACCGCTTTCGTTTCACAGAATTTGCCAGACGACAAAAAAGATAA
ATGAAGAAATATGAAGTGATTTTGCAAGATTTAGAAAAAAAGATTTTTAACGATATCTATAAAACGAACGATATTCTTCC
AAGTGAAAATGAGCTCTCTGCTAATTACGAGAGCAGTCGTTCAACAGTCAGACAGGCTTTAAAAATTTTAGAAGAGAAAG
GGCTTATTCAAAGACGACATGGCTATGGTAGCATTGTCCTCGCTCACGATAGGCTCCTTTTCCCTATCTCTGGCTTAACT
TCATACAAAGAACTACAAACCTCTATGGGTTTCCATAGTGAAACTGAGGTCATTCGATTTGAAAGACTTGAAATTAACCC
TAAACTTTCAGAAACAACTGGTTTTGCCGTTGGTGAACACGCCATAAGTATTCTCAGAAGGCGCAAAGTAGATGGCAAAT
TTTCAATTTTAGATTGGGATTTATTTTTAGAAAAATATTCCGAAGGTTTAACTCCAGAACATGCTAAAATTTCAACCTAT
GACTACTTAGAAGATACTCTAGGGCTTGATATTGCCTATGCTCAAAAGGAAGTCACGATTGATTTTGCCTGCGAAGATGA
CTTTAAATATCTTGACTTAAATCCCAAAGACCATCATGTCGTGTCTGTCAAATCTCATGTTTATCTTGCTGATAATACTC
TTTTTCAGTATACTGAATCTCGACATCAAGTCGACCGCTTTCGTTTCACAGAATTTGCCAGACGACAAAAAAGATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| treR | Streptococcus mutans UA159 |
46.414 |
99.58 |
0.462 |