Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   FTN78_RS08090 Genome accession   NZ_CP043523
Coordinates   1571699..1572481 (-) Length   260 a.a.
NCBI ID   WP_010905316.1    Uniprot ID   Q9CIG2
Organism   Lactococcus lactis subsp. lactis bv. diacetylactis strain SD96     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 1566699..1577481
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FTN78_RS08060 (FTN78_chr1599) - 1567004..1567993 (-) 990 WP_003131562.1 mevalonate kinase -
  FTN78_RS08065 (FTN78_chr1600) mvaD 1567980..1568936 (-) 957 WP_010905319.1 diphosphomevalonate decarboxylase -
  FTN78_RS08070 (FTN78_chr1601) mvk 1569242..1570174 (+) 933 WP_003131564.1 mevalonate kinase -
  FTN78_RS08075 (FTN78_chr1602) - 1570237..1570428 (+) 192 WP_003131566.1 hypothetical protein -
  FTN78_RS08080 (FTN78_chr1603) rsmI 1570505..1571380 (-) 876 WP_010905318.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  FTN78_RS08085 (FTN78_chr1604) yabA 1571380..1571706 (-) 327 WP_010905317.1 DNA replication initiation control protein YabA -
  FTN78_RS08090 (FTN78_chr1605) yaaT 1571699..1572481 (-) 783 WP_010905316.1 stage 0 sporulation family protein Regulator
  FTN78_RS08095 (FTN78_chr1606) - 1572533..1573393 (-) 861 WP_003131573.1 DNA polymerase III subunit delta' -
  FTN78_RS08100 (FTN78_chr1607) tmk 1573526..1574161 (-) 636 WP_003131575.1 dTMP kinase -
  FTN78_RS08105 (FTN78_chr1608) yycF 1574339..1575040 (+) 702 WP_003131580.1 response regulator YycF -
  FTN78_RS08110 (FTN78_chr1609) vicK 1575033..1576475 (+) 1443 WP_010905315.1 cell wall metabolism sensor histidine kinase WalK Regulator
  FTN78_RS08115 (FTN78_chr1610) vicX 1576646..1577458 (+) 813 WP_003131583.1 MBL fold metallo-hydrolase Regulator

Sequence

Protein


Download         Length: 260 a.a.        Molecular weight: 29803.27 Da        Isoelectric Point: 6.0566

>NTDB_id=338040 FTN78_RS08090 WP_010905316.1 1571699..1572481(-) (yaaT) [Lactococcus lactis subsp. lactis bv. diacetylactis strain SD96]
MIYEIKFAHGESNVFAISDIELAPQTEVILRSDKGNFYGKIVREISEEANLEIHHTIVREVNEDDLQVIAKLEERSKQAK
DKVRQLVIEQGLEMKIIDVAYNFDQMQLFISFTAENRVDFRLLLRELATTFRIRIELRQIGPRDAAKIHGGLGPCGRPLC
CSEFVYEFPNVSIKMAKNQNLSLKQNKLNGLCGRLMCCLTYEDSFYKEAQQLFPDFGEFVTTSEGKGKVVGLNVLKNRVK
IRFGEYSKDFELAEIEVNHG

Nucleotide


Download         Length: 783 bp        

>NTDB_id=338040 FTN78_RS08090 WP_010905316.1 1571699..1572481(-) (yaaT) [Lactococcus lactis subsp. lactis bv. diacetylactis strain SD96]
ATGATTTATGAAATAAAATTTGCACATGGCGAATCAAATGTATTTGCAATAAGTGATATAGAACTTGCTCCACAAACAGA
AGTTATCCTTCGTTCAGATAAGGGAAACTTTTACGGAAAAATTGTACGTGAAATTTCTGAAGAAGCGAATCTTGAAATTC
ACCACACGATTGTGCGTGAAGTAAATGAGGATGATCTCCAAGTTATTGCAAAACTTGAAGAACGTTCTAAACAAGCCAAA
GATAAAGTTCGCCAACTTGTCATCGAACAAGGTTTGGAAATGAAAATTATTGATGTTGCTTATAATTTCGACCAAATGCA
ACTTTTTATTTCGTTTACAGCAGAGAATCGTGTTGATTTTCGATTGCTTTTGCGTGAGTTGGCAACAACTTTTAGAATTA
GGATTGAACTTCGCCAAATTGGGCCAAGAGATGCGGCTAAAATTCATGGTGGACTTGGACCTTGTGGACGTCCTTTGTGC
TGTTCTGAGTTTGTTTATGAATTTCCAAATGTTTCAATCAAAATGGCCAAAAATCAAAATCTATCTTTGAAACAAAATAA
ATTGAACGGTCTTTGCGGTCGTTTGATGTGCTGTTTAACTTATGAAGATAGTTTTTATAAAGAAGCCCAACAACTTTTCC
CAGATTTTGGTGAGTTTGTAACTACCTCAGAAGGAAAAGGAAAAGTTGTTGGCTTAAATGTTTTAAAAAATAGAGTAAAA
ATCCGCTTTGGAGAATATAGCAAGGATTTTGAACTTGCAGAAATTGAGGTGAATCATGGCTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(56-140)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9CIG2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

46.119

84.231

0.388

Multiple sequence alignment