Detailed information NTG0337784

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: EQH29_RS09545
• Genome accession: NZ_CP035251
• Coordinates: 1892928..1893332 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588006.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1901935
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1887928..1898332

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH29_RS09510 (EQH29_10085)	rnpA	1888343..1888714 (-)	372	WP_000739246.1	ribonuclease P protein component	-
EQH29_RS10640	-	1888731..1888862 (-)	132	WP_000768904.1	hypothetical protein	-
EQH29_RS09515 (EQH29_10090)	-	1888863..1890053 (-)	1191	WP_000167766.1	acetate kinase	-
EQH29_RS09520 (EQH29_10095)	comYH	1890104..1891057 (-)	954	WP_000345117.1	class I SAM-dependent methyltransferase	Machinery gene
EQH29_RS09525 (EQH29_10100)	-	1891118..1891711 (-)	594	Protein_1871	class I SAM-dependent methyltransferase	-
EQH29_RS09530 (EQH29_10105)	comGG/cglG	1891848..1892261 (-)	414	WP_000265630.1	competence type IV pilus minor pilin ComGG	Machinery gene
EQH29_RS09535 (EQH29_10110)	comGF/cglF	1892239..1892700 (-)	462	WP_000250530.1	competence type IV pilus minor pilin ComGF	Machinery gene
EQH29_RS09540 (EQH29_10115)	comGE/cglE	1892663..1892965 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
EQH29_RS09545 (EQH29_10120)	comGD/cglD	1892928..1893332 (-)	405	WP_000588006.1	competence type IV pilus minor pilin ComGD	Machinery gene
EQH29_RS09550 (EQH29_10125)	comGC/cglC	1893325..1893651 (-)	327	WP_000738638.1	comG operon protein ComGC	Machinery gene
EQH29_RS09555 (EQH29_10130)	comGB/cglB	1893653..1894669 (-)	1017	WP_075270915.1	competence type IV pilus assembly protein ComGB	Machinery gene
EQH29_RS09560 (EQH29_10135)	comGA/cglA/cilD	1894617..1895558 (-)	942	WP_000249556.1	competence type IV pilus ATPase ComGA	Machinery gene
EQH29_RS09565 (EQH29_10140)	-	1895633..1895998 (-)	366	WP_000286415.1	DUF1033 family protein	-
EQH29_RS09570 (EQH29_10145)	-	1896149..1897207 (-)	1059	WP_000649471.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14636.81 Da
• Isoelectric Point: 10.2164

>NTDB_id=337784 EQH29_RS09545 WP_000588006.1 1892928..1893332(-) (comGD/cglD) [Streptococcus pneumoniae strain TVO_1901935]
MIKAFTMLESLLALSLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQTLSNGSQKLPV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=337784 EQH29_RS09545 WP_000588006.1 1892928..1893332(-) (comGD/cglD) [Streptococcus pneumoniae strain TVO_1901935]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGCTTTGAGTCTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTTCAGTCCACTTTTGCGGCAGTAGAGGAACAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAGTCTGAACTTAGATGGGCAGACGCTTAGCAATGGCAGTCAAAAGTTGCCAGTC
CCTAAAGGAATTCAGGCCCCATCAGGTCAAAGTATTACATTTGACCGTGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae Rx1	95.522	100	0.955
comGD/cglD	Streptococcus pneumoniae D39	95.522	100	0.955
comGD/cglD	Streptococcus pneumoniae R6	95.522	100	0.955
comGD/cglD	Streptococcus mitis NCTC 12261	95.489	99.254	0.948
comGD/cglD	Streptococcus mitis SK321	94.776	100	0.948
comYD	Streptococcus gordonii str. Challis substr. CH1	58.268	94.776	0.552
comYD	Streptococcus mutans UA140	49.219	95.522	0.47
comYD	Streptococcus mutans UA159	49.219	95.522	0.47