Detailed information
Bioinformatically predicted
Overview
| Name | comA/nlmT | Type | Regulator |
| Locus tag | EQH32_RS10790 | Genome accession | NZ_CP035248 |
| Coordinates | 507416..508003 (-) | Length | 195 a.a. |
| NCBI ID | WP_000205166.1 | Uniprot ID | Q9ETN5 |
| Organism | Streptococcus pneumoniae strain TVO_1901939 | ||
| Function | transport of ComC (predicted from homology) Competence regulation |
||
Genomic Context
Location: 502416..513003
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQH32_RS02555 (EQH32_02700) | - | 502866..504206 (+) | 1341 | WP_001099892.1 | sensor histidine kinase | - |
| EQH32_RS02560 (EQH32_02705) | blpC | 504250..504405 (-) | 156 | WP_000358811.1 | quorum-sensing system pheromone BlpC | - |
| EQH32_RS02565 (EQH32_02710) | - | 504462..505823 (-) | 1362 | WP_001069071.1 | bacteriocin secretion accessory protein | - |
| EQH32_RS02570 (EQH32_02715) | comA/nlmT | 505834..507324 (-) | 1491 | WP_001818755.1 | peptide cleavage/export ABC transporter | Regulator |
| EQH32_RS10790 (EQH32_02720) | comA/nlmT | 507416..508003 (-) | 588 | WP_000205166.1 | cysteine peptidase family C39 domain-containing protein | Regulator |
| EQH32_RS02575 (EQH32_02725) | blpI | 508285..508482 (+) | 198 | WP_001093259.1 | bacteriocin-like peptide BlpI | - |
| EQH32_RS02580 (EQH32_02735) | blpJ | 508949..509218 (+) | 270 | WP_001093248.1 | bacteriocin-like peptide BlpJ | - |
| EQH32_RS02585 (EQH32_02740) | blpU | 509287..509517 (+) | 231 | WP_000379964.1 | bacteriocin-like peptide BlpU | - |
| EQH32_RS02590 (EQH32_02745) | - | 509520..509639 (+) | 120 | WP_001844187.1 | PncF family bacteriocin immunity protein | - |
| EQH32_RS02595 (EQH32_02750) | - | 509938..510102 (+) | 165 | WP_000727118.1 | hypothetical protein | - |
| EQH32_RS02600 (EQH32_02755) | - | 510099..510503 (+) | 405 | WP_000846570.1 | hypothetical protein | - |
| EQH32_RS02605 (EQH32_02760) | - | 510706..511510 (+) | 805 | WP_001105180.1 | IS5 family transposase | - |
| EQH32_RS02610 (EQH32_02765) | blpM | 511660..511914 (+) | 255 | WP_000379879.1 | two-peptide bacteriocin subunit BlpM | - |
| EQH32_RS02615 (EQH32_02770) | blpN | 511930..512133 (+) | 204 | WP_001099492.1 | two-peptide bacteriocin subunit BlpN | - |
| EQH32_RS02620 (EQH32_02780) | cipB | 512377..512526 (+) | 150 | WP_001818346.1 | bacteriocin-like peptide BlpO | Regulator |
| EQH32_RS02625 (EQH32_02785) | - | 512630..512749 (+) | 120 | WP_000346296.1 | PncF family bacteriocin immunity protein | - |
Sequence
Protein
Download Length: 195 a.a. Molecular weight: 22270.71 Da Isoelectric Point: 9.6188
>NTDB_id=337643 EQH32_RS10790 WP_000205166.1 507416..508003(-) (comA/nlmT) [Streptococcus pneumoniae strain TVO_1901939]
MTSYKRTFVPQIDARDCGVAALASIAKFYGSDFSLAHLRELAKTNKEGTTALGIVKAADEMGFETRPVQADKTLFDMSDV
PYPFIVHVNKEGKLQHYYVVYQTKKDYLIIGDPDPSVKITKMSKERFFYEWTGVAIFLATKPSYQPHKDKKNGLLSKLPS
SDFQTKISHCLHCSLKLIGHYYQYRWFLLSPRNLG
MTSYKRTFVPQIDARDCGVAALASIAKFYGSDFSLAHLRELAKTNKEGTTALGIVKAADEMGFETRPVQADKTLFDMSDV
PYPFIVHVNKEGKLQHYYVVYQTKKDYLIIGDPDPSVKITKMSKERFFYEWTGVAIFLATKPSYQPHKDKKNGLLSKLPS
SDFQTKISHCLHCSLKLIGHYYQYRWFLLSPRNLG
Nucleotide
Download Length: 588 bp
>NTDB_id=337643 EQH32_RS10790 WP_000205166.1 507416..508003(-) (comA/nlmT) [Streptococcus pneumoniae strain TVO_1901939]
ATGACTTCTTATAAACGTACATTTGTTCCTCAAATAGATGCGAGAGACTGTGGTGTCGCTGCCTTAGCCTCGATTGCTAA
ATTCTATGGTTCAGATTTTTCTCTAGCTCACTTGAGAGAACTTGCAAAGACCAATAAAGAAGGGACGACTGCTCTTGGCA
TTGTAAAAGCCGCTGATGAAATGGGCTTTGAAACAAGACCTGTTCAAGCAGATAAAACGCTCTTTGACATGAGTGATGTC
CCCTATCCATTTATCGTTCACGTTAACAAAGAAGGAAAACTCCAACATTACTATGTTGTCTATCAAACAAAGAAAGACTA
TCTGATTATTGGTGATCCTGACCCTTCTGTAAAAATCACTAAAATGTCAAAAGAACGCTTTTTCTATGAATGGACTGGAG
TAGCTATTTTTCTAGCTACCAAACCCAGCTATCAACCCCATAAAGATAAAAAGAATGGTCTACTAAGCAAGCTTCCTTCC
TCTGATTTTCAAACAAAAATCTCTCATTGCTTACATTGTTCTCTCAAGCTTATTGGTCACTATTATCAATATAGGTGGTT
CTTACTATCTCCAAGGAATCTTGGATGA
ATGACTTCTTATAAACGTACATTTGTTCCTCAAATAGATGCGAGAGACTGTGGTGTCGCTGCCTTAGCCTCGATTGCTAA
ATTCTATGGTTCAGATTTTTCTCTAGCTCACTTGAGAGAACTTGCAAAGACCAATAAAGAAGGGACGACTGCTCTTGGCA
TTGTAAAAGCCGCTGATGAAATGGGCTTTGAAACAAGACCTGTTCAAGCAGATAAAACGCTCTTTGACATGAGTGATGTC
CCCTATCCATTTATCGTTCACGTTAACAAAGAAGGAAAACTCCAACATTACTATGTTGTCTATCAAACAAAGAAAGACTA
TCTGATTATTGGTGATCCTGACCCTTCTGTAAAAATCACTAAAATGTCAAAAGAACGCTTTTTCTATGAATGGACTGGAG
TAGCTATTTTTCTAGCTACCAAACCCAGCTATCAACCCCATAAAGATAAAAAGAATGGTCTACTAAGCAAGCTTCCTTCC
TCTGATTTTCAAACAAAAATCTCTCATTGCTTACATTGTTCTCTCAAGCTTATTGGTCACTATTATCAATATAGGTGGTT
CTTACTATCTCCAAGGAATCTTGGATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comA/nlmT | Streptococcus mutans UA159 |
59.89 |
93.333 |
0.559 |
| comA | Streptococcus mitis NCTC 12261 |
54.891 |
94.359 |
0.518 |
| comA | Streptococcus mitis SK321 |
54.348 |
94.359 |
0.513 |
| comA | Streptococcus pneumoniae TIGR4 |
53.804 |
94.359 |
0.508 |
| comA | Streptococcus pneumoniae Rx1 |
53.804 |
94.359 |
0.508 |
| comA | Streptococcus pneumoniae D39 |
53.804 |
94.359 |
0.508 |
| comA | Streptococcus pneumoniae R6 |
53.804 |
94.359 |
0.508 |
| comA | Streptococcus gordonii str. Challis substr. CH1 |
52.717 |
94.359 |
0.497 |