Detailed information
Bioinformatically predicted
Overview
| Name | comA/nlmT | Type | Regulator |
| Locus tag | EQH41_RS10970 | Genome accession | NZ_CP035239 |
| Coordinates | 511109..511696 (-) | Length | 195 a.a. |
| NCBI ID | WP_000205166.1 | Uniprot ID | Q9ETN5 |
| Organism | Streptococcus pneumoniae strain TVO_TIGR4 | ||
| Function | transport of ComC (predicted from homology) Competence regulation |
||
Genomic Context
Location: 506109..516696
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQH41_RS02450 (EQH41_02635) | - | 506571..507911 (+) | 1341 | WP_001017646.1 | sensor histidine kinase | - |
| EQH41_RS02455 (EQH41_02640) | blpC | 507982..508110 (-) | 129 | WP_000358815.1 | quorum-sensing system pheromone BlpC | - |
| EQH41_RS02460 (EQH41_02645) | - | 508167..509528 (-) | 1362 | WP_001069075.1 | bacteriocin secretion accessory protein | - |
| EQH41_RS10960 (EQH41_02650) | comA/nlmT | 509539..510186 (-) | 648 | WP_078064020.1 | ATP-binding cassette domain-containing protein | Regulator |
| EQH41_RS10965 (EQH41_02655) | comA/nlmT | 510202..511215 (-) | 1014 | WP_307772067.1 | ABC transporter transmembrane domain-containing protein | Regulator |
| EQH41_RS10970 (EQH41_02660) | comA/nlmT | 511109..511696 (-) | 588 | WP_000205166.1 | cysteine peptidase family C39 domain-containing protein | Regulator |
| EQH41_RS02470 (EQH41_02665) | blpI | 511978..512175 (+) | 198 | WP_001093259.1 | bacteriocin-like peptide BlpI | - |
| EQH41_RS02475 (EQH41_02675) | blpJ | 512642..512911 (+) | 270 | WP_001093248.1 | bacteriocin-like peptide BlpJ | - |
| EQH41_RS02480 (EQH41_02680) | blpU | 512980..513210 (+) | 231 | WP_000379967.1 | bacteriocin-like peptide BlpU | - |
| EQH41_RS02485 (EQH41_02685) | - | 513213..513332 (+) | 120 | WP_000346296.1 | PncF family bacteriocin immunity protein | - |
| EQH41_RS02490 (EQH41_02690) | - | 513629..513793 (+) | 165 | WP_000727118.1 | hypothetical protein | - |
| EQH41_RS02495 (EQH41_02695) | - | 513790..514194 (+) | 405 | WP_000846943.1 | hypothetical protein | - |
| EQH41_RS02500 (EQH41_02700) | - | 514397..515201 (+) | 805 | WP_100214365.1 | IS5 family transposase | - |
| EQH41_RS02505 (EQH41_02705) | blpM | 515351..515605 (+) | 255 | WP_000379879.1 | two-peptide bacteriocin subunit BlpM | - |
| EQH41_RS02510 (EQH41_02710) | blpN | 515621..515824 (+) | 204 | WP_001099492.1 | two-peptide bacteriocin subunit BlpN | - |
| EQH41_RS02515 (EQH41_02720) | cipB | 516068..516217 (+) | 150 | WP_001818346.1 | bacteriocin-like peptide BlpO | Regulator |
| EQH41_RS02520 (EQH41_02725) | - | 516321..516440 (+) | 120 | WP_000346296.1 | PncF family bacteriocin immunity protein | - |
Sequence
Protein
Download Length: 195 a.a. Molecular weight: 22270.71 Da Isoelectric Point: 9.6188
>NTDB_id=337024 EQH41_RS10970 WP_000205166.1 511109..511696(-) (comA/nlmT) [Streptococcus pneumoniae strain TVO_TIGR4]
MTSYKRTFVPQIDARDCGVAALASIAKFYGSDFSLAHLRELAKTNKEGTTALGIVKAADEMGFETRPVQADKTLFDMSDV
PYPFIVHVNKEGKLQHYYVVYQTKKDYLIIGDPDPSVKITKMSKERFFYEWTGVAIFLATKPSYQPHKDKKNGLLSKLPS
SDFQTKISHCLHCSLKLIGHYYQYRWFLLSPRNLG
MTSYKRTFVPQIDARDCGVAALASIAKFYGSDFSLAHLRELAKTNKEGTTALGIVKAADEMGFETRPVQADKTLFDMSDV
PYPFIVHVNKEGKLQHYYVVYQTKKDYLIIGDPDPSVKITKMSKERFFYEWTGVAIFLATKPSYQPHKDKKNGLLSKLPS
SDFQTKISHCLHCSLKLIGHYYQYRWFLLSPRNLG
Nucleotide
Download Length: 588 bp
>NTDB_id=337024 EQH41_RS10970 WP_000205166.1 511109..511696(-) (comA/nlmT) [Streptococcus pneumoniae strain TVO_TIGR4]
ATGACTTCTTATAAACGTACATTTGTTCCTCAAATAGATGCGAGAGACTGTGGTGTCGCTGCCTTAGCCTCGATTGCTAA
ATTCTATGGTTCAGATTTTTCTCTAGCTCACTTGAGAGAACTTGCAAAGACCAATAAAGAAGGGACGACTGCTCTTGGCA
TTGTAAAAGCCGCTGATGAAATGGGCTTTGAAACAAGACCTGTTCAAGCAGATAAAACGCTCTTTGACATGAGTGATGTC
CCCTATCCATTTATCGTTCACGTTAACAAAGAAGGAAAACTCCAACATTACTATGTTGTCTATCAAACAAAGAAAGACTA
TCTGATTATTGGTGATCCTGACCCTTCTGTAAAAATCACTAAAATGTCAAAAGAACGCTTTTTCTATGAATGGACTGGAG
TAGCTATTTTTCTAGCTACCAAACCCAGCTATCAACCCCATAAAGATAAAAAGAATGGTCTACTAAGCAAGCTTCCTTCC
TCTGATTTTCAAACAAAAATCTCTCATTGCTTACATTGTTCTCTCAAGCTTATTGGTCACTATTATCAATATAGGTGGTT
CTTACTATCTCCAAGGAATCTTGGATGA
ATGACTTCTTATAAACGTACATTTGTTCCTCAAATAGATGCGAGAGACTGTGGTGTCGCTGCCTTAGCCTCGATTGCTAA
ATTCTATGGTTCAGATTTTTCTCTAGCTCACTTGAGAGAACTTGCAAAGACCAATAAAGAAGGGACGACTGCTCTTGGCA
TTGTAAAAGCCGCTGATGAAATGGGCTTTGAAACAAGACCTGTTCAAGCAGATAAAACGCTCTTTGACATGAGTGATGTC
CCCTATCCATTTATCGTTCACGTTAACAAAGAAGGAAAACTCCAACATTACTATGTTGTCTATCAAACAAAGAAAGACTA
TCTGATTATTGGTGATCCTGACCCTTCTGTAAAAATCACTAAAATGTCAAAAGAACGCTTTTTCTATGAATGGACTGGAG
TAGCTATTTTTCTAGCTACCAAACCCAGCTATCAACCCCATAAAGATAAAAAGAATGGTCTACTAAGCAAGCTTCCTTCC
TCTGATTTTCAAACAAAAATCTCTCATTGCTTACATTGTTCTCTCAAGCTTATTGGTCACTATTATCAATATAGGTGGTT
CTTACTATCTCCAAGGAATCTTGGATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comA/nlmT | Streptococcus mutans UA159 |
59.89 |
93.333 |
0.559 |
| comA | Streptococcus mitis NCTC 12261 |
54.891 |
94.359 |
0.518 |
| comA | Streptococcus mitis SK321 |
54.348 |
94.359 |
0.513 |
| comA | Streptococcus pneumoniae TIGR4 |
53.804 |
94.359 |
0.508 |
| comA | Streptococcus pneumoniae Rx1 |
53.804 |
94.359 |
0.508 |
| comA | Streptococcus pneumoniae D39 |
53.804 |
94.359 |
0.508 |
| comA | Streptococcus pneumoniae R6 |
53.804 |
94.359 |
0.508 |
| comA | Streptococcus gordonii str. Challis substr. CH1 |
52.717 |
94.359 |
0.497 |