Detailed information NTG0033546

Bioinformatically predicted

Overview

• Name: amiC
• Type: Regulator
• Locus tag: SEQ_RS09390
• Genome accession: NC_012471
• Coordinates: 1923784..1925283 (-)
• Length: 499 a.a.
• NCBI ID: WP_012680091.1
• Uniprot ID: C0M8C1
• Organism: Streptococcus equi subsp. equi 4047
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1918784..1930283

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SEQ_RS09375 (SEQ_1915)	amiF	1920863..1921786 (-)	924	WP_012680088.1	ATP-binding cassette domain-containing protein	Regulator
SEQ_RS09380 (SEQ_1916)	amiE	1921779..1922849 (-)	1071	WP_012680089.1	ABC transporter ATP-binding protein	Regulator
SEQ_RS09385 (SEQ_1917)	amiD	1922858..1923784 (-)	927	WP_012680090.1	oligopeptide ABC transporter permease OppC	Regulator
SEQ_RS09390 (SEQ_1918)	amiC	1923784..1925283 (-)	1500	WP_012680091.1	ABC transporter permease	Regulator
SEQ_RS09395 (SEQ_1919)	amiA3	1925347..1927323 (-)	1977	WP_042357209.1	peptide ABC transporter substrate-binding protein	Regulator
SEQ_RS09400 (SEQ_1920)	pbp3	1927631..1928869 (+)	1239	WP_012680093.1	D-alanyl-D-alanine carboxypeptidase PBP3	-

Sequence

Protein

• Length: 499 a.a.
• Molecular weight: 55622.05 Da
• Isoelectric Point: 10.1102

>NTDB_id=33546 SEQ_RS09390 WP_012680091.1 1923784..1925283(-) (amiC) [Streptococcus equi subsp. equi 4047]
MKKYIFERILRSLVSILLVTALTYTIVFTLVPKSLIFKQDPNYNKMVTTPDKKTNYLNTVFENMGYISYYSSKELQNKAS
KLDPSVTTAPTKANEKIYQKYIASVGNGWKLGRFTESKGFYAVREIPIYERVWNFFSHLVVIDHPWKIKDPKNPNLERYV
RPEIDPAVGPALVGSGTKHKYLIYFNKQFPFIHQNIVTFDLGVSYPTYANIPVVQVITQGQGRTLQKEVTFPTGKTKLSS
IDIYSRTYKTPSSLDSKDIANFGKGDAYTNTQNNYAEPSMIANSFKIGIVGVLLSYLFGLPIGMLMAYYKNGWFDRFSTA
ATTFMLALPSIALIYIVRFVGSYLGLPDTFPLLGAGDVRSYVLPALILGILGTPSTVVWFRRYIVDLQGSDFVRFARAKG
LSEFEISKNHLFKQAMVPIVNGIPQAIVGTIAGATLTETVFAFPGMGKMLIDSIKAANNSMVVGLVFIFAVLSILALLVG
DILMTILDPRIKLSGKGGK

Nucleotide

• Length: 1500 bp

>NTDB_id=33546 SEQ_RS09390 WP_012680091.1 1923784..1925283(-) (amiC) [Streptococcus equi subsp. equi 4047]
ATGAAAAAATACATATTTGAACGCATATTGAGGTCGCTTGTTTCAATCCTGCTGGTAACCGCACTAACCTATACTATTGT
CTTTACCTTAGTGCCAAAAAGCTTGATTTTTAAGCAAGACCCTAATTACAATAAAATGGTGACAACACCTGATAAGAAAA
CCAATTATCTAAATACTGTTTTTGAAAATATGGGCTATATTTCCTATTACAGCAGTAAAGAACTGCAGAATAAGGCTTCA
AAGCTTGATCCTTCTGTAACAACTGCACCAACCAAGGCCAATGAAAAAATATATCAAAAATATATTGCTTCTGTCGGTAA
TGGTTGGAAGCTTGGGCGCTTTACAGAAAGTAAGGGATTTTATGCCGTTAGAGAGATTCCAATCTATGAGCGCGTGTGGA
ATTTCTTTAGCCATTTGGTTGTGATTGATCACCCATGGAAAATCAAGGATCCAAAAAATCCAAATCTAGAGCGTTATGTG
CGACCAGAAATTGACCCTGCTGTTGGTCCAGCCTTAGTTGGCTCTGGTACTAAGCACAAATACTTGATTTACTTCAACAA
GCAATTTCCATTTATCCATCAAAATATCGTAACCTTTGATTTGGGAGTGTCCTATCCAACCTATGCCAATATTCCAGTTG
TTCAGGTTATCACTCAAGGACAAGGAAGAACACTTCAAAAAGAGGTCACCTTCCCAACAGGCAAAACAAAGCTGTCTTCA
ATCGATATTTACTCTCGAACCTATAAAACACCAAGCTCTTTAGATAGCAAGGATATTGCCAATTTTGGTAAGGGTGATGC
TTATACCAATACACAAAATAACTATGCAGAGCCATCTATGATTGCAAATTCCTTTAAGATTGGTATTGTCGGTGTCTTGT
TGTCCTATCTTTTTGGTTTGCCAATTGGTATGCTGATGGCTTATTATAAGAATGGCTGGTTTGACCGCTTTTCAACGGCT
GCCACAACCTTTATGTTAGCCCTGCCAAGCATTGCGCTTATCTATATTGTTCGATTTGTCGGTTCTTATTTGGGCTTGCC
AGATACCTTTCCGCTGCTAGGAGCAGGAGATGTTAGGTCTTATGTGCTGCCTGCTCTTATATTAGGAATTCTTGGTACAC
CAAGTACAGTAGTTTGGTTCCGACGCTATATTGTGGACTTGCAAGGCAGTGATTTTGTTCGCTTTGCACGAGCAAAGGGG
CTTTCAGAATTTGAGATTTCAAAAAATCATCTCTTTAAGCAGGCTATGGTGCCTATTGTTAACGGTATTCCACAAGCCAT
TGTCGGAACAATTGCCGGTGCAACCTTGACAGAAACCGTCTTTGCTTTCCCAGGAATGGGTAAAATGCTGATTGATTCCA
TAAAAGCTGCTAATAACTCTATGGTTGTTGGTCTTGTCTTTATTTTTGCTGTTTTATCAATATTAGCCTTGCTAGTAGGT
GATATTCTTATGACAATTTTAGATCCACGTATTAAATTATCAGGTAAAGGAGGTAAGTAA

Domains

Predicted by InterproScan.

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (299-492)

3D structure

• AlphaFold DB: C0M8C1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiC	Streptococcus salivarius strain HSISS4	62.525	100	0.625
amiC	Streptococcus thermophilus LMG 18311	62.525	100	0.625
amiC	Streptococcus thermophilus LMD-9	62.325	100	0.623