Detailed information NTG0334154

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: FXN59_RS04730
• Genome accession: NZ_CP043004
• Coordinates: 887552..888256 (-)
• Length: 234 a.a.
• NCBI ID: WP_148328291.1
• Uniprot ID: -
• Organism: Aggregatibacter actinomycetemcomitans strain HK_973
• Function: require for natural transformation (predicted from homology) Unclear

Genomic Context

Location: 882552..893256

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FXN59_RS04710 (FXN59_04710)	-	882601..883284 (-)	684	WP_005542522.1	2,3-diphosphoglycerate-dependent phosphoglycerate mutase	-
FXN59_RS04715 (FXN59_04715)	-	883590..885248 (+)	1659	WP_005595409.1	phospho-sugar mutase	-
FXN59_RS04720 (FXN59_04720)	envC	885457..886716 (+)	1260	WP_148327243.1	murein hydrolase activator EnvC	-
FXN59_RS04725 (FXN59_04725)	-	886722..887540 (+)	819	WP_392388690.1	divergent polysaccharide deacetylase family protein	-
FXN59_RS04730 (FXN59_04730)	comM	887552..888256 (-)	705	WP_148328291.1	ATP-binding protein	Machinery gene
FXN59_RS04735 (FXN59_04735)	-	888391..889053 (+)	663	WP_148327240.1	TnsA endonuclease N-terminal domain-containing protein	-
FXN59_RS04740 (FXN59_04740)	-	889046..890965 (+)	1920	WP_151294362.1	Mu transposase C-terminal domain-containing protein	-
FXN59_RS04745 (FXN59_04745)	-	890965..891858 (+)	894	WP_005541478.1	TniB family NTP-binding protein	-
FXN59_RS04750 (FXN59_04750)	-	891816..892898 (+)	1083	WP_151294364.1	TniQ family protein	-

Sequence

Protein

• Length: 234 a.a.
• Molecular weight: 26224.18 Da
• Isoelectric Point: 10.0496

>NTDB_id=334154 FXN59_RS04730 WP_148328291.1 887552..888256(-) (comM) [Aggregatibacter actinomycetemcomitans strain HK_973]
MPLICNFDSGTIPKPGEISLAHNGVLFLDELPEFERKVLDALRQPLESGEIIISRANAKIQFPAKFQLIAAMNPSPTGHY
QGTHNRTSPQQVMRYLNRLSGPFLDRFDLSIEVPLLPQGSLQNIGDRGESSATVREKVLKTRAIQLQRASKINAHLNSKE
IERDCKLTDKNALFLENALTKLGLSVRAYHRILKVSRTIADLDGEQHINQRHLAEALGYRAMDRLLQKLAKNSA

Nucleotide

• Length: 705 bp

>NTDB_id=334154 FXN59_RS04730 WP_148328291.1 887552..888256(-) (comM) [Aggregatibacter actinomycetemcomitans strain HK_973]
ATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGTGTGTTATT
TTTAGATGAATTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTT
CCCGTGCCAACGCGAAGATTCAATTTCCGGCAAAATTTCAACTGATTGCCGCGATGAACCCTAGCCCGACAGGGCATTAT
CAAGGCACGCATAATCGCACCTCACCACAACAAGTTATGCGTTATCTGAATCGTTTGTCCGGCCCTTTTTTAGATCGCTT
CGATTTATCCATTGAAGTGCCCTTATTGCCACAAGGTAGCTTACAAAATATCGGCGATCGTGGCGAATCCAGCGCAACGG
TGCGAGAAAAAGTCCTGAAAACCCGTGCCATTCAACTTCAGCGCGCCAGCAAAATTAATGCCCATTTAAATAGCAAAGAA
ATCGAACGGGACTGCAAACTTACCGACAAAAACGCACTATTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACG
GGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGG
CCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCATAA

Domains

Predicted by InterProScan.

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (9-118)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (128-220)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Haemophilus influenzae Rd KW20	86.087	98.291	0.846
comM	Glaesserella parasuis strain SC1401	80.603	99.145	0.799
comM	Vibrio cholerae O1 biovar El Tor strain E7946	66.968	94.444	0.632
comM	Vibrio cholerae strain A1552	66.968	94.444	0.632
comM	Vibrio campbellii strain DS40M4	64.706	94.444	0.611
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	52.444	96.154	0.504
comM	Legionella pneumophila str. Paris	52.336	91.453	0.479
comM	Legionella pneumophila strain ERS1305867	52.336	91.453	0.479
comM	Acinetobacter baylyi ADP1	50.467	91.453	0.462