Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   EMO93_RS04325 Genome accession   NZ_CP035003
Coordinates   859339..860055 (+) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   A0A7U7IEW1
Organism   Staphylococcus aureus strain PCFA-221     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 854339..865055
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EMO93_RS04295 - 854606..855232 (+) 627 WP_000522384.1 nitroreductase family protein -
  EMO93_RS04300 - 855540..856325 (+) 786 WP_000867947.1 carbon-nitrogen family hydrolase -
  EMO93_RS14230 hld 856927..857007 (-) 81 WP_000046022.1 delta-hemolysin -
  EMO93_RS04310 agrB 857297..857866 (+) 570 WP_001105708.1 accessory gene regulator AgrB -
  EMO93_RS04315 agrD 857863..858003 (+) 141 WP_001093929.1 cyclic lactone autoinducer peptide AgrD -
  EMO93_RS04320 agrC 858028..859320 (+) 1293 WP_001825886.1 quorum-sensing sensor histidine kinase AgrC -
  EMO93_RS04325 agrA 859339..860055 (+) 717 WP_000688492.1 quorum-sensing response regulator AgrA Regulator
  EMO93_RS04330 - 860429..861388 (-) 960 WP_001253294.1 carbohydrate kinase -
  EMO93_RS04335 - 861385..862869 (-) 1485 WP_000141407.1 sucrose-6-phosphate hydrolase -
  EMO93_RS04340 - 863018..863968 (-) 951 WP_000790325.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=333891 EMO93_RS04325 WP_000688492.1 859339..860055(+) (agrA) [Staphylococcus aureus strain PCFA-221]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=333891 EMO93_RS04325 WP_000688492.1 859339..860055(+) (agrA) [Staphylococcus aureus strain PCFA-221]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACGTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCAGAATTAAGAACTCGAATTATAGATTGTTTAGAAACTGCACATACACGCTTACAATTAT
TATCAAAAGATAATAGCGTTGAAACGATTGAGTTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTCAGATGTCATAATAGCTTTGTCGTCAATCGTCATAATATCGAATCTATTG
ATTCGAAAGAGCGTATTGTTTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7IEW1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1

Multiple sequence alignment