Detailed information
Bioinformatically predicted
Overview
| Name | comEA/comE1 | Type | Machinery gene |
| Locus tag | EO082_RS19180 | Genome accession | NZ_CP034967 |
| Coordinates | 4168014..4168334 (+) | Length | 106 a.a. |
| NCBI ID | WP_164537658.1 | Uniprot ID | - |
| Organism | Aeromonas veronii strain ZfB1 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4163014..4173334
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EO082_RS19165 (EO082_19235) | yfbV | 4163454..4163894 (-) | 441 | WP_005339116.1 | terminus macrodomain insulation protein YfbV | - |
| EO082_RS19170 (EO082_19240) | - | 4164199..4165401 (+) | 1203 | WP_005349210.1 | acetate kinase | - |
| EO082_RS19175 (EO082_19245) | pta | 4165456..4167636 (+) | 2181 | WP_005339119.1 | phosphate acetyltransferase | - |
| EO082_RS19180 (EO082_19250) | comEA/comE1 | 4168014..4168334 (+) | 321 | WP_164537658.1 | ComEA family DNA-binding protein | Machinery gene |
| EO082_RS19185 (EO082_19255) | galU | 4168431..4169342 (+) | 912 | WP_164537659.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| EO082_RS19190 (EO082_19260) | - | 4169556..4170953 (+) | 1398 | WP_164537660.1 | peptide MFS transporter | - |
| EO082_RS19195 (EO082_19265) | - | 4171028..4171999 (-) | 972 | WP_164537661.1 | response regulator | - |
| EO082_RS19200 (EO082_19270) | - | 4172238..4172936 (+) | 699 | WP_040065009.1 | DnaT-like ssDNA-binding domain-containing protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11314.33 Da Isoelectric Point: 9.6564
>NTDB_id=333775 EO082_RS19180 WP_164537658.1 4168014..4168334(+) (comEA/comE1) [Aeromonas veronii strain ZfB1]
MLMKKLSAVMLLACLPLFSQPVLAADKVAPKQTTTAEVAKETGKLNINTATLAELTSLKGIGDKKAQAIVDYREKQGKFT
SVDQLADVNGIGPATLEANRDMIIVK
MLMKKLSAVMLLACLPLFSQPVLAADKVAPKQTTTAEVAKETGKLNINTATLAELTSLKGIGDKKAQAIVDYREKQGKFT
SVDQLADVNGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=333775 EO082_RS19180 WP_164537658.1 4168014..4168334(+) (comEA/comE1) [Aeromonas veronii strain ZfB1]
ATGCTGATGAAGAAGCTCTCAGCAGTCATGCTGCTGGCCTGCTTGCCCCTGTTCAGCCAACCCGTGCTGGCCGCAGATAA
GGTAGCACCCAAGCAAACCACCACAGCCGAGGTCGCCAAGGAGACCGGCAAGCTGAATATCAATACGGCCACCCTTGCCG
AACTCACCAGCCTGAAAGGGATTGGTGACAAGAAGGCACAAGCCATCGTCGACTATCGGGAAAAACAGGGAAAGTTCACC
TCGGTCGATCAGCTGGCAGATGTCAATGGCATTGGCCCGGCCACGCTGGAAGCCAACCGTGACATGATCATCGTCAAATA
A
ATGCTGATGAAGAAGCTCTCAGCAGTCATGCTGCTGGCCTGCTTGCCCCTGTTCAGCCAACCCGTGCTGGCCGCAGATAA
GGTAGCACCCAAGCAAACCACCACAGCCGAGGTCGCCAAGGAGACCGGCAAGCTGAATATCAATACGGCCACCCTTGCCG
AACTCACCAGCCTGAAAGGGATTGGTGACAAGAAGGCACAAGCCATCGTCGACTATCGGGAAAAACAGGGAAAGTTCACC
TCGGTCGATCAGCTGGCAGATGTCAATGGCATTGGCCCGGCCACGCTGGAAGCCAACCGTGACATGATCATCGTCAAATA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
46.903 |
100 |
0.5 |
| comEA | Vibrio cholerae C6706 |
49.057 |
100 |
0.491 |
| comEA | Vibrio cholerae strain A1552 |
49.057 |
100 |
0.491 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
45.361 |
91.509 |
0.415 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
66.129 |
58.491 |
0.387 |
| comEA | Legionella pneumophila str. Paris |
39.394 |
93.396 |
0.368 |
| comEA | Legionella pneumophila strain ERS1305867 |
39.394 |
93.396 |
0.368 |