NTDB

Overview

Name	comFC/cflB	Type	Machinery gene
Locus tag	FGL73_RS02710	Genome accession	NZ_CP042408
Coordinates	566734..567384 (-)	Length	216 a.a.
NCBI ID	WP_058205632.1	Uniprot ID	-
Organism	Lactococcus lactis strain CBA3619
Function	ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 561734..572384

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGL73_RS02680 (FGL73_02680)	-	561889..563421 (+)	1533	WP_098393893.1	Nramp family divalent metal transporter	-
FGL73_RS02685 (FGL73_02685)	-	563523..564491 (+)	969	WP_146977982.1	PhoH family protein	-
FGL73_RS02690 (FGL73_02690)	-	564549..565028 (+)	480	WP_146977983.1	NUDIX hydrolase	-
FGL73_RS02695 (FGL73_02695)	ybeY	565180..565668 (+)	489	WP_003130652.1	rRNA maturation RNase YbeY	-
FGL73_RS02700 (FGL73_02700)	-	565652..566107 (+)	456	WP_003130653.1	diacylglycerol kinase family protein	-
FGL73_RS02705 (FGL73_02705)	-	566121..566699 (+)	579	WP_146977984.1	nucleotidyltransferase family protein	-
FGL73_RS02710 (FGL73_02710)	comFC/cflB	566734..567384 (-)	651	WP_058205632.1	ComF family protein	Machinery gene
FGL73_RS02715 (FGL73_02715)	comFA	567381..568703 (-)	1323	WP_146977985.1	DEAD/DEAH box helicase	Machinery gene
FGL73_RS02720 (FGL73_02720)	-	568760..569389 (+)	630	WP_098393888.1	YigZ family protein	-
FGL73_RS02725 (FGL73_02725)	-	569523..570020 (+)	498	WP_146977986.1	VanZ family protein	-
FGL73_RS02730 (FGL73_02730)	-	570068..571087 (+)	1020	WP_038601219.1	DUF475 domain-containing protein	-
FGL73_RS02735 (FGL73_02735)	-	571202..571948 (+)	747	WP_038601216.1	bifunctional metallophosphatase/5'-nucleotidase	-

Sequence

Protein

Download Length: 216 a.a. Molecular weight: 25409.55 Da Isoelectric Point: 9.2298

                                >NTDB_id=331560 FGL73_RS02710 WP_058205632.1 566734..567384(-) (comFC/cflB) [Lactococcus lactis strain CBA3619]

MIKCLLCSRNIAQNFLFSELFLLKSPQNLLCSQCQKNFEKIPEAHCPRCCKPNVHEICTDCQNWEKRGYKIRHQAIFHYN

QAMKDYFSLYKFVGDYRLYQIFEPYFKNISPKFSLVPIPISPKRLEERGFNQVTAFLSQENFIELLEKENSVKQSSLNRK

ERLESPNPFRLKKGLKVPTKVILIDDIYTTGTTLYHASQILKEAGVHEIRSFSLCR

Nucleotide

Download Length: 651 bp

                                >NTDB_id=331560 FGL73_RS02710 WP_058205632.1 566734..567384(-) (comFC/cflB) [Lactococcus lactis strain CBA3619]

ATGATAAAGTGTTTGCTTTGTTCAAGAAATATTGCTCAAAACTTTCTATTTAGTGAACTTTTCCTACTTAAAAGTCCTCA

AAATCTTTTATGTTCTCAATGTCAAAAAAATTTTGAAAAAATCCCTGAAGCTCACTGTCCTCGCTGCTGCAAGCCAAACG

TCCATGAGATCTGTACTGATTGTCAAAATTGGGAAAAAAGAGGATACAAAATCAGACATCAGGCAATTTTTCACTACAAT

CAAGCAATGAAAGATTATTTTAGTCTGTATAAATTTGTGGGAGATTATCGATTATACCAAATTTTCGAGCCTTATTTTAA

AAATATTTCCCCAAAATTCTCTTTGGTTCCGATTCCTATTTCACCCAAAAGATTAGAGGAACGTGGTTTCAATCAAGTGA

CTGCTTTTCTTTCACAAGAGAATTTTATTGAACTTCTTGAAAAAGAGAATTCCGTCAAACAATCTAGCCTTAATCGAAAA

GAACGATTGGAAAGTCCAAATCCTTTTCGATTAAAAAAAGGGCTAAAAGTCCCTACAAAAGTTATATTAATTGACGATAT

TTATACAACAGGTACCACCTTATATCACGCATCACAAATTCTAAAAGAAGCTGGTGTTCATGAAATAAGGAGCTTTTCTC

TCTGCCGTTAA

Domains

Predicted by InterProScan.

Phosphoribosyl transferase domain (Pribosyltran)

(175-215)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
comFC/cflB	Streptococcus mitis NCTC 12261	45.909	100	0.468
comFC/cflB	Streptococcus mitis SK321	45.455	100	0.463
comFC/cflB	Streptococcus pneumoniae Rx1	44.545	100	0.454
comFC/cflB	Streptococcus pneumoniae D39	44.545	100	0.454
comFC/cflB	Streptococcus pneumoniae R6	44.545	100	0.454
comFC/cflB	Streptococcus pneumoniae TIGR4	44.545	100	0.454
comFC	Lactococcus lactis subsp. cremoris KW2	67.91	62.037	0.421
comFC	Bacillus subtilis subsp. subtilis str. 168	37.179	100	0.403

Detailed information NTG0331560