Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | SaO267_RS01520 | Genome accession | NZ_CP034102 |
| Coordinates | 327904..328323 (+) | Length | 139 a.a. |
| NCBI ID | WP_000934796.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain O267 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 322904..333323
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SaO267_RS01460 (SaO267_00268) | - | 323136..323597 (-) | 462 | WP_000524999.1 | hypothetical protein | - |
| SaO267_RS01465 (SaO267_00269) | - | 323610..323939 (-) | 330 | WP_000429766.1 | helix-turn-helix transcriptional regulator | - |
| SaO267_RS01470 (SaO267_00270) | - | 324100..324291 (+) | 192 | WP_001115060.1 | helix-turn-helix transcriptional regulator | - |
| SaO267_RS15015 (SaO267_00271) | - | 324379..324555 (+) | 177 | WP_001001356.1 | hypothetical protein | - |
| SaO267_RS01475 (SaO267_00272) | - | 324552..324782 (-) | 231 | WP_000549547.1 | hypothetical protein | - |
| SaO267_RS01480 (SaO267_00273) | - | 324839..325591 (+) | 753 | WP_001148596.1 | phage antirepressor KilAC domain-containing protein | - |
| SaO267_RS01485 (SaO267_00274) | - | 325607..325804 (+) | 198 | WP_001202628.1 | hypothetical protein | - |
| SaO267_RS15150 | - | 325816..325947 (+) | 132 | Protein_282 | MW1434 family type I TA system toxin | - |
| SaO267_RS01490 (SaO267_00275) | - | 325950..326213 (+) | 264 | WP_001124184.1 | helix-turn-helix domain-containing protein | - |
| SaO267_RS01495 (SaO267_00276) | - | 326226..326387 (+) | 162 | WP_001285948.1 | DUF1270 domain-containing protein | - |
| SaO267_RS01500 (SaO267_00277) | - | 326490..326792 (+) | 303 | WP_126116953.1 | DUF2482 family protein | - |
| SaO267_RS01505 (SaO267_00278) | - | 326797..327057 (+) | 261 | WP_000291499.1 | DUF1108 family protein | - |
| SaO267_RS01510 (SaO267_00279) | - | 327067..327288 (+) | 222 | WP_000815403.1 | DUF2483 family protein | - |
| SaO267_RS01515 (SaO267_00280) | - | 327281..327904 (+) | 624 | WP_000139727.1 | DUF1071 domain-containing protein | - |
| SaO267_RS01520 (SaO267_00281) | ssbA | 327904..328323 (+) | 420 | WP_000934796.1 | single-stranded DNA-binding protein | Machinery gene |
| SaO267_RS01525 (SaO267_00282) | - | 328337..329032 (+) | 696 | WP_001124448.1 | putative HNHc nuclease | - |
| SaO267_RS01530 (SaO267_00283) | - | 329004..329803 (+) | 800 | Protein_291 | phage replisome organizer N-terminal domain-containing protein | - |
| SaO267_RS01535 (SaO267_00284) | - | 329803..330159 (+) | 357 | WP_001132243.1 | hypothetical protein | - |
| SaO267_RS01540 (SaO267_00285) | - | 330156..331397 (+) | 1242 | WP_126116954.1 | DnaB helicase C-terminal domain-containing protein | - |
| SaO267_RS01545 (SaO267_00286) | - | 331394..331609 (+) | 216 | WP_061731561.1 | hypothetical protein | - |
| SaO267_RS01550 (SaO267_00287) | - | 331613..331834 (+) | 222 | WP_001123688.1 | DUF3269 family protein | - |
| SaO267_RS01555 (SaO267_00288) | - | 331844..332248 (+) | 405 | WP_000049813.1 | DUF1064 domain-containing protein | - |
| SaO267_RS01560 (SaO267_00289) | - | 332253..332438 (+) | 186 | WP_065315894.1 | DUF3113 family protein | - |
| SaO267_RS01565 (SaO267_00290) | - | 332439..332707 (+) | 269 | Protein_298 | helix-turn-helix transcriptional regulator | - |
| SaO267_RS01570 (SaO267_00291) | - | 332708..333079 (+) | 372 | WP_001140276.1 | SA1788 family PVL leukocidin-associated protein | - |
Sequence
Protein
Download Length: 139 a.a. Molecular weight: 15606.24 Da Isoelectric Point: 7.0171
>NTDB_id=328986 SaO267_RS01520 WP_000934796.1 327904..328323(+) (ssbA) [Staphylococcus aureus strain O267]
MLNRVVLVGRLTKDPELRSTPNGVNVGTFTLAVNRTFTNAQGEREADFINVVVFKKQAENVKNYLSKGSLAGVDGRLQTR
SYDNKEGRRVFVTEVVADSVQFLEPKNNNKQNNQQHNGQTQTGNNPFDNTEEDFSDLPF
MLNRVVLVGRLTKDPELRSTPNGVNVGTFTLAVNRTFTNAQGEREADFINVVVFKKQAENVKNYLSKGSLAGVDGRLQTR
SYDNKEGRRVFVTEVVADSVQFLEPKNNNKQNNQQHNGQTQTGNNPFDNTEEDFSDLPF
Nucleotide
Download Length: 420 bp
>NTDB_id=328986 SaO267_RS01520 WP_000934796.1 327904..328323(+) (ssbA) [Staphylococcus aureus strain O267]
ATGTTAAACAGAGTAGTTTTAGTAGGACGATTAACAAAAGACCCAGAATTAAGAAGTACACCAAATGGCGTAAATGTAGG
GACATTCACATTAGCAGTAAACAGAACATTTACGAATGCTCAAGGCGAGCGTGAAGCAGATTTTATAAACGTAGTAGTGT
TCAAAAAACAAGCTGAAAACGTTAAAAACTACCTTTCTAAAGGATCGTTGGCAGGTGTAGACGGACGACTACAAACACGC
AGTTACGATAACAAAGAAGGGCGACGTGTATTTGTGACAGAAGTAGTAGCGGACAGCGTTCAATTCTTAGAACCGAAGAA
TAACAACAAACAGAATAACCAACAACACAACGGACAAACTCAAACTGGTAATAATCCGTTCGACAATACCGAAGAAGACT
TTTCTGACTTACCGTTCTGA
ATGTTAAACAGAGTAGTTTTAGTAGGACGATTAACAAAAGACCCAGAATTAAGAAGTACACCAAATGGCGTAAATGTAGG
GACATTCACATTAGCAGTAAACAGAACATTTACGAATGCTCAAGGCGAGCGTGAAGCAGATTTTATAAACGTAGTAGTGT
TCAAAAAACAAGCTGAAAACGTTAAAAACTACCTTTCTAAAGGATCGTTGGCAGGTGTAGACGGACGACTACAAACACGC
AGTTACGATAACAAAGAAGGGCGACGTGTATTTGTGACAGAAGTAGTAGCGGACAGCGTTCAATTCTTAGAACCGAAGAA
TAACAACAAACAGAATAACCAACAACACAACGGACAAACTCAAACTGGTAATAATCCGTTCGACAATACCGAAGAAGACT
TTTCTGACTTACCGTTCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
80.374 |
76.978 |
0.619 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
53.947 |
100 |
0.59 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.091 |
79.137 |
0.468 |
| ssbB/cilA | Streptococcus mitis SK321 |
40.288 |
100 |
0.403 |
| ssbA | Streptococcus mutans UA159 |
45.378 |
85.612 |
0.388 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
49.057 |
76.259 |
0.374 |