Detailed information NTG0327708

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: FNV58_RS10430
• Genome accession: NZ_CP041654
• Coordinates: 1898351..1899004 (+)
• Length: 217 a.a.
• NCBI ID: WP_054233834.1
• Uniprot ID: A0A250VJP6
• Organism: Streptomyces sp. RLB1-9
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1893351..1904004

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FNV58_RS10415 (FNV58_10500)	-	1894909..1895918 (-)	1010	Protein_1843	IS110 family transposase	-
FNV58_RS10420 (FNV58_10505)	-	1896284..1896766 (-)	483	WP_143600466.1	VOC family protein	-
FNV58_RS10425 (FNV58_10510)	-	1896925..1898148 (+)	1224	WP_143612575.1	epoxide hydrolase family protein	-
FNV58_RS10430 (FNV58_10515)	clpP	1898351..1899004 (+)	654	WP_054233834.1	ATP-dependent Clp protease proteolytic subunit	Regulator
FNV58_RS10435 (FNV58_10520)	clpP	1899006..1899608 (+)	603	WP_054233833.1	ATP-dependent Clp protease proteolytic subunit	Regulator
FNV58_RS57945 (FNV58_10525)	-	1899678..1900151 (-)	474	WP_097283232.1	helix-turn-helix transcriptional regulator	-
FNV58_RS10445 (FNV58_10530)	-	1900239..1900760 (-)	522	WP_079089687.1	DinB family protein	-
FNV58_RS10450 (FNV58_10535)	-	1901035..1901262 (+)	228	WP_054233831.1	DUF5133 domain-containing protein	-
FNV58_RS10455 (FNV58_10540)	-	1901372..1902715 (-)	1344	WP_164331635.1	diacylglycerol kinase family protein	-
FNV58_RS10460 (FNV58_10545)	-	1902929..1903372 (-)	444	WP_054233829.1	response regulator	-

Sequence

Protein

• Length: 217 a.a.
• Molecular weight: 23611.63 Da
• Isoelectric Point: 5.0747

>NTDB_id=327708 FNV58_RS10430 WP_054233834.1 1898351..1899004(+) (clpP) [Streptomyces sp. RLB1-9]
MTPLITGRYPAHAPRAEDGDTPATRFDDHLAAQLLAQRIVLLGTQVDEVSANRVCAQLLVLSAEDPRTDISLYINSPGGS
VTAGLAIYDTMRLIPNDVSTLAMGFAASMGQFLLSVGTHGKRYALPNARIMMHQPSAGIGGTTADIEIQAQNLEFTKQAI
ERITAEHTGQSEETISRDGDRDRWFTAEQAKEYGMVDRVVESLDDVRPAASRRRMGL

Nucleotide

• Length: 654 bp

>NTDB_id=327708 FNV58_RS10430 WP_054233834.1 1898351..1899004(+) (clpP) [Streptomyces sp. RLB1-9]
ATGACTCCACTCATCACCGGCCGGTACCCGGCCCACGCACCGCGCGCCGAGGACGGCGACACCCCCGCGACCCGCTTCGA
CGACCACCTGGCCGCCCAGCTGCTCGCGCAGCGCATCGTCCTGCTCGGCACCCAGGTCGACGAGGTGTCCGCGAACCGGG
TCTGCGCCCAGCTGCTCGTACTGTCGGCGGAGGACCCGCGCACCGACATCAGCCTGTACATCAACAGCCCGGGCGGCTCG
GTGACCGCGGGACTCGCGATCTACGACACCATGCGGCTGATCCCCAACGACGTCTCGACCCTCGCCATGGGATTCGCCGC
GAGCATGGGGCAGTTCCTGCTCAGCGTCGGCACCCACGGCAAGCGGTACGCGCTGCCCAACGCGCGGATCATGATGCACC
AACCGTCGGCGGGCATCGGCGGCACCACCGCAGACATCGAGATCCAGGCGCAGAACCTGGAGTTCACCAAGCAGGCCATC
GAGCGGATCACCGCGGAGCACACCGGCCAGAGCGAGGAGACGATCTCCCGGGACGGCGACCGCGACCGCTGGTTCACGGC
CGAACAGGCCAAGGAGTACGGCATGGTGGACCGGGTCGTGGAGTCGCTCGACGACGTCCGCCCGGCCGCGTCACGGCGAC
GGATGGGGCTCTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (30-201)

3D structure

• AlphaFold DB: A0A250VJP6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	50	82.028	0.41
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	49.711	79.724	0.396
clpP	Streptococcus pneumoniae D39	47.399	79.724	0.378
clpP	Streptococcus pneumoniae R6	47.399	79.724	0.378
clpP	Streptococcus pneumoniae TIGR4	47.399	79.724	0.378
clpP	Streptococcus pneumoniae Rx1	47.399	79.724	0.378
clpP	Lactococcus lactis subsp. cremoris KW2	46.286	80.645	0.373
clpP	Streptococcus pyogenes JRS4	46.286	80.645	0.373
clpP	Streptococcus pyogenes MGAS315	46.286	80.645	0.373
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	45.714	80.645	0.369
clpP	Streptococcus thermophilus LMG 18311	45.665	79.724	0.364
clpP	Streptococcus thermophilus LMD-9	45.665	79.724	0.364