Detailed information NTG0326712

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: EGM96_RS04030
• Genome accession: NZ_CP033876
• Coordinates: 859979..861037 (+)
• Length: 352 a.a.
• NCBI ID: WP_031961398.1
• Uniprot ID: A0AAD2U6A0
• Organism: Acinetobacter baumannii strain WU_164
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 854979..866037

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EGM96_RS04015 (EGM96_04030)	-	856085..856417 (+)	333	WP_000169602.1	hypothetical protein	-
EGM96_RS04020 (EGM96_04035)	-	856420..857244 (+)	825	WP_002019666.1	putative RNA methyltransferase	-
EGM96_RS04025 (EGM96_04040)	ponA	857262..859817 (-)	2556	WP_031965088.1	penicillin-binding protein PBP1a	-
EGM96_RS04030 (EGM96_04045)	pilM	859979..861037 (+)	1059	WP_031961398.1	pilus assembly protein PilM	Machinery gene
EGM96_RS04035 (EGM96_04050)	pilN	861037..861678 (+)	642	WP_031961396.1	PilN domain-containing protein	Machinery gene
EGM96_RS04040 (EGM96_04055)	pilO	861675..862415 (+)	741	WP_000076106.1	type 4a pilus biogenesis protein PilO	Machinery gene
EGM96_RS04045 (EGM96_04060)	pilP	862426..862953 (+)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
EGM96_RS04050 (EGM96_04065)	pilQ	863016..865181 (+)	2166	WP_001017033.1	type IV pilus secretin PilQ family protein	Machinery gene
EGM96_RS04055 (EGM96_04070)	aroK	865193..865762 (+)	570	WP_000643712.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39046.61 Da
• Isoelectric Point: 4.4657

>NTDB_id=326712 EGM96_RS04030 WP_031961398.1 859979..861037(+) (pilM) [Acinetobacter baumannii strain WU_164]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDEEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=326712 EGM96_RS04030 WP_031961398.1 859979..861037(+) (pilM) [Acinetobacter baumannii strain WU_164]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGAAGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCGGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTTGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGCCATACCATGACAACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTTTTCGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCAGAGCGAAAAAAGATCGTTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGCTCACTACAATTTTTCTTTTCCTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	99.716	100	0.997
comM	Acinetobacter nosocomialis M2	98.864	100	0.989
comM	Acinetobacter baylyi ADP1	81.25	100	0.813
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423