Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | EEA47_RS07495 | Genome accession | NZ_CP033457 |
| Coordinates | 1575496..1576089 (-) | Length | 197 a.a. |
| NCBI ID | WP_064354357.1 | Uniprot ID | A0AAW7A2J1 |
| Organism | Vibrio alginolyticus strain SNU_SP1 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1570496..1581089
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EEA47_RS07475 (EEA47_07745) | aroB | 1571382..1572482 (-) | 1101 | WP_005381318.1 | 3-dehydroquinate synthase | - |
| EEA47_RS07480 (EEA47_07750) | aroK | 1572514..1573032 (-) | 519 | WP_005381319.1 | shikimate kinase AroK | - |
| EEA47_RS07485 (EEA47_07755) | pilQ | 1573220..1574965 (-) | 1746 | WP_213908265.1 | type IV pilus secretin PilQ | Machinery gene |
| EEA47_RS07490 (EEA47_07760) | pilP | 1574991..1575506 (-) | 516 | WP_005382766.1 | pilus assembly protein PilP | Machinery gene |
| EEA47_RS07495 (EEA47_07765) | pilO | 1575496..1576089 (-) | 594 | WP_064354357.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| EEA47_RS07500 (EEA47_07770) | pilN | 1576082..1576657 (-) | 576 | WP_054577259.1 | PilN domain-containing protein | Machinery gene |
| EEA47_RS07505 (EEA47_07775) | pilM | 1576641..1577657 (-) | 1017 | WP_017821733.1 | type IV pilus biogenesis protein PilM | Machinery gene |
| EEA47_RS07510 (EEA47_07780) | - | 1577802..1580363 (+) | 2562 | WP_025768081.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 197 a.a. Molecular weight: 23029.56 Da Isoelectric Point: 5.0885
>NTDB_id=323806 EEA47_RS07495 WP_064354357.1 1575496..1576089(-) (pilO) [Vibrio alginolyticus strain SNU_SP1]
MVDWQDLEIDEMAEWPLLPQIIVIALLIMVIQGLGYWFYLKPKDEQLNHLIQQEQTLKVALKIKANKVAALPQLQSQLDE
LTTRYELLLQQLPAQKELATMLASVNELGIDNKLTFTRIDWGEKQSEHFLYRLPLNIELTGDFHDIGHFSQAIATLPRII
TFKDVTWQRVSQESETLHFRVRANTYQFKPEETKNDK
MVDWQDLEIDEMAEWPLLPQIIVIALLIMVIQGLGYWFYLKPKDEQLNHLIQQEQTLKVALKIKANKVAALPQLQSQLDE
LTTRYELLLQQLPAQKELATMLASVNELGIDNKLTFTRIDWGEKQSEHFLYRLPLNIELTGDFHDIGHFSQAIATLPRII
TFKDVTWQRVSQESETLHFRVRANTYQFKPEETKNDK
Nucleotide
Download Length: 594 bp
>NTDB_id=323806 EEA47_RS07495 WP_064354357.1 1575496..1576089(-) (pilO) [Vibrio alginolyticus strain SNU_SP1]
GTGGTTGATTGGCAGGATCTCGAAATCGATGAAATGGCCGAGTGGCCATTGTTGCCCCAGATTATAGTAATCGCGCTTCT
GATCATGGTGATTCAAGGCTTAGGTTATTGGTTTTACCTTAAACCGAAAGACGAACAGTTGAATCACTTGATCCAGCAGG
AGCAGACACTCAAGGTGGCATTGAAGATCAAAGCGAACAAAGTGGCAGCGTTGCCTCAGCTTCAATCTCAATTGGATGAA
CTTACCACCCGTTACGAGTTATTGCTGCAGCAACTGCCTGCGCAAAAAGAGCTGGCTACAATGCTCGCTTCAGTGAATGA
ACTTGGCATCGACAATAAGCTGACTTTCACCCGAATCGACTGGGGCGAAAAACAATCAGAGCACTTCCTTTATCGTCTCC
CTTTAAACATTGAGTTAACGGGTGACTTTCATGACATCGGCCATTTTTCTCAGGCGATAGCGACGCTACCTCGAATCATC
ACGTTTAAAGATGTGACTTGGCAACGTGTCAGCCAAGAGAGCGAAACTCTGCACTTTCGGGTGCGCGCTAACACCTATCA
GTTTAAGCCGGAGGAGACGAAAAATGACAAGTAA
GTGGTTGATTGGCAGGATCTCGAAATCGATGAAATGGCCGAGTGGCCATTGTTGCCCCAGATTATAGTAATCGCGCTTCT
GATCATGGTGATTCAAGGCTTAGGTTATTGGTTTTACCTTAAACCGAAAGACGAACAGTTGAATCACTTGATCCAGCAGG
AGCAGACACTCAAGGTGGCATTGAAGATCAAAGCGAACAAAGTGGCAGCGTTGCCTCAGCTTCAATCTCAATTGGATGAA
CTTACCACCCGTTACGAGTTATTGCTGCAGCAACTGCCTGCGCAAAAAGAGCTGGCTACAATGCTCGCTTCAGTGAATGA
ACTTGGCATCGACAATAAGCTGACTTTCACCCGAATCGACTGGGGCGAAAAACAATCAGAGCACTTCCTTTATCGTCTCC
CTTTAAACATTGAGTTAACGGGTGACTTTCATGACATCGGCCATTTTTCTCAGGCGATAGCGACGCTACCTCGAATCATC
ACGTTTAAAGATGTGACTTGGCAACGTGTCAGCCAAGAGAGCGAAACTCTGCACTTTCGGGTGCGCGCTAACACCTATCA
GTTTAAGCCGGAGGAGACGAAAAATGACAAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Vibrio campbellii strain DS40M4 |
86.842 |
96.447 |
0.838 |
| pilO | Vibrio cholerae strain A1552 |
70.157 |
96.954 |
0.68 |