Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | EEA47_RS07490 | Genome accession | NZ_CP033457 |
| Coordinates | 1574991..1575506 (-) | Length | 171 a.a. |
| NCBI ID | WP_005382766.1 | Uniprot ID | A0A2I3CBC3 |
| Organism | Vibrio alginolyticus strain SNU_SP1 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1569991..1580506
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EEA47_RS07475 (EEA47_07745) | aroB | 1571382..1572482 (-) | 1101 | WP_005381318.1 | 3-dehydroquinate synthase | - |
| EEA47_RS07480 (EEA47_07750) | aroK | 1572514..1573032 (-) | 519 | WP_005381319.1 | shikimate kinase AroK | - |
| EEA47_RS07485 (EEA47_07755) | pilQ | 1573220..1574965 (-) | 1746 | WP_213908265.1 | type IV pilus secretin PilQ | Machinery gene |
| EEA47_RS07490 (EEA47_07760) | pilP | 1574991..1575506 (-) | 516 | WP_005382766.1 | pilus assembly protein PilP | Machinery gene |
| EEA47_RS07495 (EEA47_07765) | pilO | 1575496..1576089 (-) | 594 | WP_064354357.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| EEA47_RS07500 (EEA47_07770) | pilN | 1576082..1576657 (-) | 576 | WP_054577259.1 | PilN domain-containing protein | Machinery gene |
| EEA47_RS07505 (EEA47_07775) | pilM | 1576641..1577657 (-) | 1017 | WP_017821733.1 | type IV pilus biogenesis protein PilM | Machinery gene |
| EEA47_RS07510 (EEA47_07780) | - | 1577802..1580363 (+) | 2562 | WP_025768081.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19065.24 Da Isoelectric Point: 10.4342
>NTDB_id=323805 EEA47_RS07490 WP_005382766.1 1574991..1575506(-) (pilP) [Vibrio alginolyticus strain SNU_SP1]
MTSKSLLLVLMGSLLMGCQANDESLTDFIRGVETQARREVEKLKPADKYVAVTYAPEVQRAPFELPKEATIATQPVARKD
CWQPPSRRRTGKLEKFPLSQLRLKGVMGMDNTVSGLVQAPNGTVYKVKPGQYLGRNNGKVTHVSHSYLLINETLPDGLGC
WQKRKVKLALR
MTSKSLLLVLMGSLLMGCQANDESLTDFIRGVETQARREVEKLKPADKYVAVTYAPEVQRAPFELPKEATIATQPVARKD
CWQPPSRRRTGKLEKFPLSQLRLKGVMGMDNTVSGLVQAPNGTVYKVKPGQYLGRNNGKVTHVSHSYLLINETLPDGLGC
WQKRKVKLALR
Nucleotide
Download Length: 516 bp
>NTDB_id=323805 EEA47_RS07490 WP_005382766.1 1574991..1575506(-) (pilP) [Vibrio alginolyticus strain SNU_SP1]
ATGACAAGTAAGTCTTTGTTGCTGGTACTGATGGGTTCTCTATTGATGGGCTGCCAGGCGAATGATGAATCATTGACGGA
TTTTATTCGAGGAGTGGAAACACAGGCGCGTCGAGAGGTCGAGAAGCTTAAGCCCGCAGACAAGTATGTTGCAGTCACGT
ACGCACCGGAAGTACAGCGTGCACCCTTTGAATTGCCCAAAGAAGCCACCATCGCGACTCAGCCAGTTGCAAGAAAAGAT
TGTTGGCAACCGCCCTCAAGAAGGCGAACTGGAAAATTAGAAAAATTCCCATTAAGCCAATTACGTTTGAAAGGGGTCAT
GGGCATGGATAACACGGTTTCTGGCCTCGTTCAGGCTCCCAATGGCACCGTCTATAAAGTTAAGCCGGGTCAATACCTTG
GACGCAATAATGGCAAAGTGACCCATGTCAGCCACTCCTATTTGTTGATTAATGAAACGTTGCCCGACGGCTTAGGATGT
TGGCAAAAACGTAAAGTTAAGTTGGCTTTGAGATAG
ATGACAAGTAAGTCTTTGTTGCTGGTACTGATGGGTTCTCTATTGATGGGCTGCCAGGCGAATGATGAATCATTGACGGA
TTTTATTCGAGGAGTGGAAACACAGGCGCGTCGAGAGGTCGAGAAGCTTAAGCCCGCAGACAAGTATGTTGCAGTCACGT
ACGCACCGGAAGTACAGCGTGCACCCTTTGAATTGCCCAAAGAAGCCACCATCGCGACTCAGCCAGTTGCAAGAAAAGAT
TGTTGGCAACCGCCCTCAAGAAGGCGAACTGGAAAATTAGAAAAATTCCCATTAAGCCAATTACGTTTGAAAGGGGTCAT
GGGCATGGATAACACGGTTTCTGGCCTCGTTCAGGCTCCCAATGGCACCGTCTATAAAGTTAAGCCGGGTCAATACCTTG
GACGCAATAATGGCAAAGTGACCCATGTCAGCCACTCCTATTTGTTGATTAATGAAACGTTGCCCGACGGCTTAGGATGT
TGGCAAAAACGTAAAGTTAAGTTGGCTTTGAGATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Vibrio campbellii strain DS40M4 |
84.795 |
100 |
0.848 |
| pilP | Vibrio cholerae strain A1552 |
56.977 |
100 |
0.573 |