Detailed information NTG0321641

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: CDG68_RS04680
• Genome accession: NZ_CP033133
• Coordinates: 384274..385332 (+)
• Length: 352 a.a.
• NCBI ID: WP_087552975.1
• Uniprot ID: -
• Organism: Acinetobacter wuhouensis strain WCHAW010062
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 379274..390332

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CDG68_RS04665 (CDG68_04670)	mraY	379493..380611 (+)	1119	WP_068975054.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-
CDG68_RS04670 (CDG68_04675)	-	380682..381485 (+)	804	WP_087552973.1	putative RNA methyltransferase	-
CDG68_RS04675 (CDG68_04680)	ponA	381554..384109 (-)	2556	WP_087552974.1	penicillin-binding protein PBP1a	-
CDG68_RS04680 (CDG68_04685)	comM	384274..385332 (+)	1059	WP_087552975.1	pilus assembly protein PilM	Machinery gene
CDG68_RS04685 (CDG68_04690)	pilN	385332..385967 (+)	636	WP_087552976.1	PilN domain-containing protein	Machinery gene
CDG68_RS04690 (CDG68_04695)	pilO	385964..386695 (+)	732	WP_087552977.1	type 4a pilus biogenesis protein PilO	Machinery gene
CDG68_RS04695 (CDG68_04700)	pilP	386692..387222 (+)	531	WP_087552978.1	pilus assembly protein PilP	Machinery gene
CDG68_RS04700 (CDG68_04705)	pilQ	387288..389420 (+)	2133	WP_410169814.1	type IV pilus secretin PilQ	Machinery gene
CDG68_RS04705 (CDG68_04710)	aroK	389457..389999 (+)	543	WP_068975062.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 38979.66 Da
• Isoelectric Point: 4.5394

>NTDB_id=321641 CDG68_RS04680 WP_087552975.1 384274..385332(+) (comM) [Acinetobacter wuhouensis strain WCHAW010062]
MLRLYRKPNKGLIGVDISSTTVKILELSVKNGRYWVESYGLSPLLEGSVVEKNILNPEAVADALERAVNLANPQSQNVAV
AVPTSMVIHKVIEMDADMSDEEREVQIRMDAEQYIPFPLDEVSLDFEVLNDKLANPNRVNVLLVATRAENIESRVEVLEI
AGLSPKIADVESYAMERAFAVFSDTLPIGANLVGVLDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTQDVQNRYGLSYEE
AGRAKKDRTLPDDFETEVLMPFLEAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLSKLLQQKLGYRVTIANPFL
QMGFSPQIDLKKIENDAPSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=321641 CDG68_RS04680 WP_087552975.1 384274..385332(+) (comM) [Acinetobacter wuhouensis strain WCHAW010062]
GTGCTTAGACTATATCGTAAGCCAAATAAGGGGTTAATAGGAGTAGATATTAGTTCTACTACTGTAAAGATTTTAGAGCT
CTCTGTTAAAAACGGTCGTTACTGGGTTGAAAGCTACGGATTAAGTCCGCTTCTTGAGGGGAGTGTGGTCGAGAAAAATA
TTCTTAATCCTGAAGCAGTTGCGGATGCATTGGAACGTGCAGTGAATCTTGCCAATCCACAATCGCAAAATGTAGCGGTT
GCTGTACCTACGTCTATGGTGATTCATAAAGTCATCGAGATGGATGCAGACATGTCTGATGAAGAACGGGAAGTTCAGAT
CCGAATGGATGCTGAGCAGTACATCCCATTCCCACTCGATGAAGTTAGCCTAGATTTTGAAGTTCTCAATGATAAGTTGG
CAAATCCAAACCGCGTTAATGTACTCTTGGTTGCAACCCGCGCTGAGAATATTGAATCTCGCGTTGAAGTCTTAGAAATA
GCAGGTTTATCGCCCAAAATTGCAGACGTCGAAAGTTATGCGATGGAACGAGCTTTTGCTGTTTTTTCAGATACATTGCC
AATCGGTGCAAATCTTGTGGGTGTCCTTGATATCGGTCATACCATGACGACGTTATCAGTGATGCAAAATGGCAAAATTA
TCTATACCCGTGAACAAGTATTTGGTGGAAAGCAACTGACGCAGGACGTACAAAACCGTTATGGTTTGTCGTATGAAGAA
GCTGGGCGTGCGAAGAAAGATCGTACATTGCCAGATGACTTTGAAACTGAAGTGTTAATGCCATTTTTAGAAGCTGTGGT
TCAACAAGCAGCGCGTTCACTACAGTTCTTCTTCTCATCTTCTCAATTCAATGAGATTGATCATATTTTATTGGCAGGGG
GGAATGCCAATATTCCTGGTTTATCTAAATTATTACAACAAAAATTAGGCTACCGTGTCACGATTGCAAATCCTTTCTTG
CAAATGGGATTCTCACCACAAATTGATTTGAAAAAAATTGAGAATGATGCGCCATCATTGATGGTTGCGTGTGGCTTAGC
TTTGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	85.511	100	0.855
pilM	Acinetobacter baumannii D1279779	85.227	100	0.852
comM	Acinetobacter baylyi ADP1	81.818	100	0.818
pilM	Legionella pneumophila strain ERS1305867	42.535	100	0.429