Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | CDG68_RS04685 | Genome accession | NZ_CP033133 |
| Coordinates | 385332..385967 (+) | Length | 211 a.a. |
| NCBI ID | WP_087552976.1 | Uniprot ID | - |
| Organism | Acinetobacter wuhouensis strain WCHAW010062 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 380332..390967
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CDG68_RS04670 (CDG68_04675) | - | 380682..381485 (+) | 804 | WP_087552973.1 | putative RNA methyltransferase | - |
| CDG68_RS04675 (CDG68_04680) | ponA | 381554..384109 (-) | 2556 | WP_087552974.1 | penicillin-binding protein PBP1a | - |
| CDG68_RS04680 (CDG68_04685) | comM | 384274..385332 (+) | 1059 | WP_087552975.1 | pilus assembly protein PilM | Machinery gene |
| CDG68_RS04685 (CDG68_04690) | pilN | 385332..385967 (+) | 636 | WP_087552976.1 | PilN domain-containing protein | Machinery gene |
| CDG68_RS04690 (CDG68_04695) | pilO | 385964..386695 (+) | 732 | WP_087552977.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| CDG68_RS04695 (CDG68_04700) | pilP | 386692..387222 (+) | 531 | WP_087552978.1 | pilus assembly protein PilP | Machinery gene |
| CDG68_RS04700 (CDG68_04705) | pilQ | 387288..389420 (+) | 2133 | WP_410169814.1 | type IV pilus secretin PilQ | Machinery gene |
| CDG68_RS04705 (CDG68_04710) | aroK | 389457..389999 (+) | 543 | WP_068975062.1 | shikimate kinase AroK | - |
Sequence
Protein
Download Length: 211 a.a. Molecular weight: 23558.92 Da Isoelectric Point: 5.4306
>NTDB_id=321642 CDG68_RS04685 WP_087552976.1 385332..385967(+) (pilN) [Acinetobacter wuhouensis strain WCHAW010062]
MAKINLLPWRDELREQKKKQFVAVCVGVALVALVSVLLAWFYFDHKLEDQEQANQLVTSTNQNLDTQLKTLDGLQERRNA
IIERMKLIQGLQGQRPVIVRLVDELVRVVPAQMYITKFSRAGDKFTIEGKAESPNTVAEFLRGLEASEWYRNAFMNSFLA
ADENKNKAPTSVIPRVEESYGSFVVTVDLGEIASNVDGDATKAEQAAGGAK
MAKINLLPWRDELREQKKKQFVAVCVGVALVALVSVLLAWFYFDHKLEDQEQANQLVTSTNQNLDTQLKTLDGLQERRNA
IIERMKLIQGLQGQRPVIVRLVDELVRVVPAQMYITKFSRAGDKFTIEGKAESPNTVAEFLRGLEASEWYRNAFMNSFLA
ADENKNKAPTSVIPRVEESYGSFVVTVDLGEIASNVDGDATKAEQAAGGAK
Nucleotide
Download Length: 636 bp
>NTDB_id=321642 CDG68_RS04685 WP_087552976.1 385332..385967(+) (pilN) [Acinetobacter wuhouensis strain WCHAW010062]
ATGGCAAAGATTAACTTACTCCCTTGGCGTGATGAGCTAAGAGAGCAGAAAAAGAAACAATTTGTCGCAGTTTGTGTTGG
GGTTGCATTAGTTGCTTTGGTTTCAGTGTTATTGGCATGGTTTTATTTTGATCACAAACTAGAAGATCAAGAACAAGCCA
ACCAATTGGTTACTAGTACCAACCAAAACTTGGATACACAATTAAAAACCTTAGATGGCCTACAGGAACGTCGTAATGCG
ATTATTGAGCGCATGAAGTTAATTCAAGGTTTGCAAGGTCAGCGTCCAGTCATTGTTCGTTTAGTGGATGAATTAGTACG
TGTTGTCCCTGCACAAATGTATATCACTAAATTTAGTCGTGCTGGTGATAAGTTCACGATTGAAGGGAAAGCTGAAAGTC
CAAATACGGTAGCGGAGTTTTTACGTGGATTAGAAGCTTCAGAATGGTATCGCAATGCATTTATGAATTCATTCTTGGCT
GCTGACGAAAATAAAAATAAGGCACCAACTTCTGTGATTCCACGAGTAGAAGAATCATATGGATCTTTTGTGGTGACTGT
TGATTTGGGTGAAATCGCATCTAATGTAGATGGAGATGCAACGAAAGCTGAACAAGCTGCTGGGGGTGCAAAATGA
ATGGCAAAGATTAACTTACTCCCTTGGCGTGATGAGCTAAGAGAGCAGAAAAAGAAACAATTTGTCGCAGTTTGTGTTGG
GGTTGCATTAGTTGCTTTGGTTTCAGTGTTATTGGCATGGTTTTATTTTGATCACAAACTAGAAGATCAAGAACAAGCCA
ACCAATTGGTTACTAGTACCAACCAAAACTTGGATACACAATTAAAAACCTTAGATGGCCTACAGGAACGTCGTAATGCG
ATTATTGAGCGCATGAAGTTAATTCAAGGTTTGCAAGGTCAGCGTCCAGTCATTGTTCGTTTAGTGGATGAATTAGTACG
TGTTGTCCCTGCACAAATGTATATCACTAAATTTAGTCGTGCTGGTGATAAGTTCACGATTGAAGGGAAAGCTGAAAGTC
CAAATACGGTAGCGGAGTTTTTACGTGGATTAGAAGCTTCAGAATGGTATCGCAATGCATTTATGAATTCATTCTTGGCT
GCTGACGAAAATAAAAATAAGGCACCAACTTCTGTGATTCCACGAGTAGAAGAATCATATGGATCTTTTGTGGTGACTGT
TGATTTGGGTGAAATCGCATCTAATGTAGATGGAGATGCAACGAAAGCTGAACAAGCTGCTGGGGGTGCAAAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Acinetobacter baumannii D1279779 |
71.362 |
100 |
0.72 |
| comN | Acinetobacter baylyi ADP1 |
67.943 |
99.052 |
0.673 |