Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   D9777_RS17615 Genome accession   NZ_CP033054
Coordinates   3476434..3477447 (-) Length   337 a.a.
NCBI ID   WP_021495365.1    Uniprot ID   -
Organism   Bacillus velezensis strain Bac57     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 3471434..3482447
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9777_RS17580 - 3471717..3472193 (+) 477 WP_007408672.1 Na+/H+ antiporter subunit E -
  D9777_RS17585 - 3472193..3472477 (+) 285 WP_003152057.1 Na(+)/H(+) antiporter subunit F1 -
  D9777_RS17590 mnhG 3472461..3472835 (+) 375 WP_007613429.1 monovalent cation/H(+) antiporter subunit G -
  D9777_RS17595 - 3472875..3473258 (-) 384 WP_007613430.1 hotdog fold thioesterase -
  D9777_RS17600 comA 3473280..3473924 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  D9777_RS17605 comP 3474005..3476308 (-) 2304 WP_021495364.1 histidine kinase Regulator
  D9777_RS21850 comX 3476328..3476507 (-) 180 WP_306383677.1 competence pheromone ComX -
  D9777_RS17615 comQ 3476434..3477447 (-) 1014 WP_021495365.1 class 1 isoprenoid biosynthesis enzyme Regulator
  D9777_RS17620 degQ 3477578..3477718 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  D9777_RS17630 - 3478184..3478525 (+) 342 WP_021495366.1 hypothetical protein -
  D9777_RS17635 - 3478532..3479755 (-) 1224 WP_007613436.1 EAL and HDOD domain-containing protein -
  D9777_RS17640 - 3479885..3481351 (-) 1467 WP_014418767.1 nicotinate phosphoribosyltransferase -
  D9777_RS17645 - 3481332..3481919 (-) 588 WP_121692600.1 isochorismatase family cysteine hydrolase -
  D9777_RS17650 - 3482016..3482414 (-) 399 WP_021495368.1 YueI family protein -

Sequence

Protein


Download         Length: 337 a.a.        Molecular weight: 38787.52 Da        Isoelectric Point: 5.1716

>NTDB_id=320962 D9777_RS17615 WP_021495365.1 3476434..3477447(-) (comQ) [Bacillus velezensis strain Bac57]
MKTIIEQMCLDADQIKNKMKSIIERNIFNEHLMQLLLSFIEPKKNFSLAESAVLHYVIFDGENQETAVNLGAAIEILTLT
SDIIDDLEDEDNRDAPWMKIDRSLALNAAFSLYTAGLQSINSISTNPLVIKYVLKYIQDAMQGQHDDLINKPKTEDECLE
VIKLKCGSLFALANVTGTLLATGEFNKSVESYSYYKGIFEQISGDYHAIFKDNTSDILKDKHTLINLYLKRLFNKSSQEL
LCIFSDQKLYSQLRLNKKEFIQKLYDSGASQYVSVLYQLYMYKCETEVENLNLDIKKIKIIKKHLLNNKNNKKDDEDAEF
NKLFFELSGCIKETEKQ

Nucleotide


Download         Length: 1014 bp        

>NTDB_id=320962 D9777_RS17615 WP_021495365.1 3476434..3477447(-) (comQ) [Bacillus velezensis strain Bac57]
GTGAAGACAATTATTGAGCAAATGTGTTTAGATGCTGACCAAATCAAGAATAAAATGAAGAGTATAATAGAGCGGAACAT
ATTTAATGAACATCTAATGCAGCTCCTTCTCAGTTTTATTGAACCAAAAAAAAATTTTTCTCTAGCTGAATCAGCTGTTT
TGCATTATGTGATCTTTGACGGCGAAAATCAAGAAACCGCAGTGAACTTAGGTGCCGCTATTGAAATTCTTACACTTACT
TCCGATATAATTGATGATCTGGAAGATGAGGATAATCGAGATGCTCCTTGGATGAAGATAGATCGTTCACTAGCATTAAA
TGCAGCATTTTCATTATACACAGCAGGATTGCAAAGCATTAATTCGATTAGTACGAATCCTTTAGTGATTAAGTATGTAT
TAAAATATATTCAAGATGCAATGCAGGGTCAACATGATGATTTGATCAATAAACCAAAGACAGAAGATGAATGTTTAGAG
GTAATCAAGTTAAAATGCGGAAGTTTATTTGCGTTAGCAAATGTTACTGGTACGCTTTTAGCAACTGGAGAATTCAATAA
GTCTGTTGAAAGTTATTCCTATTATAAAGGGATATTTGAACAAATTTCCGGCGATTATCATGCTATTTTTAAGGATAATA
CTAGTGATATTCTGAAAGATAAACATACATTGATTAATTTATATCTTAAGCGCTTGTTTAATAAGTCTTCTCAAGAATTG
CTTTGTATATTCTCAGATCAAAAATTATATTCGCAACTGCGGCTTAATAAAAAAGAGTTTATTCAAAAGCTGTATGATTC
TGGAGCATCTCAATATGTTTCGGTTTTATACCAACTATACATGTATAAGTGTGAAACTGAAGTTGAAAATTTAAATTTAG
ATATAAAGAAGATAAAAATAATAAAAAAACACTTGTTGAATAATAAGAATAATAAGAAGGATGATGAAGATGCAGAATTT
AATAAATTATTTTTTGAATTATCCGGATGTATTAAAGAAACTGAAAAGCAATGA

Domains

Predicted by InterproScan.

Polyprenyl synthetase (polyprenyl_synt)

(59-232)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

62.284

85.757

0.534

Multiple sequence alignment