Detailed information NTG0317151

Bioinformatically predicted

Overview

• Name: dprA/cilB/dalA
• Type: Machinery gene
• Locus tag: D7D50_RS08055
• Genome accession: NZ_CP032620
• Coordinates: 1611688..1612530 (-)
• Length: 280 a.a.
• NCBI ID: WP_120701957.1
• Uniprot ID: -
• Organism: Streptococcus koreensis strain KCOM 2890 (=JS71)
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1606688..1617530

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D7D50_RS08040 (D7D50_08040)	-	1608035..1608739 (-)	705	WP_120701956.1	DUF3307 domain-containing protein	-
D7D50_RS08045 (D7D50_08045)	-	1608723..1609400 (-)	678	WP_023023209.1	SatD family protein	-
D7D50_RS08050 (D7D50_08050)	topA	1609508..1611595 (-)	2088	WP_023026804.1	type I DNA topoisomerase	-
D7D50_RS08055 (D7D50_08055)	dprA/cilB/dalA	1611688..1612530 (-)	843	WP_120701957.1	DNA-processing protein DprA	Machinery gene
D7D50_RS08060 (D7D50_08060)	-	1612607..1613533 (-)	927	WP_120701958.1	ROK family protein	-
D7D50_RS08065 (D7D50_08065)	-	1613546..1614316 (-)	771	WP_120701959.1	ribonuclease HII	-
D7D50_RS08070 (D7D50_08070)	ylqF	1614303..1615154 (-)	852	WP_023023197.1	ribosome biogenesis GTPase YlqF	-
D7D50_RS08075 (D7D50_08075)	-	1615280..1615618 (-)	339	WP_006597242.1	ATP cone domain-containing protein	-
D7D50_RS08080 (D7D50_08080)	dapA	1615690..1616625 (-)	936	WP_023023195.1	4-hydroxy-tetrahydrodipicolinate synthase	-

Sequence

Protein

• Length: 280 a.a.
• Molecular weight: 31485.21 Da
• Isoelectric Point: 6.4978

>NTDB_id=317151 D7D50_RS08055 WP_120701957.1 1611688..1612530(-) (dprA/cilB/dalA) [Streptococcus koreensis strain KCOM 2890 (=JS71)]
MNKYELYKLKVSGLSNLQVFNIVNYWEMNGEWPSLELIAKIAGCRNQTLFMERYIRIDDKVLMEEFKEFDSISIMDSEYP
EELLWMHNPPVLLFYSGNIDLLKHPKIAVVGSRSCSRTGIQSVEKIIYELNNELIVVSGLAKGIDAAAHYAAIRNGGKTI
GVIGTGLDVFYPRSNKQLQKYMSVSHLVLTEYGPGQSPQKHHFPERNRIIAGLSRAVIVAEARMRSGSLITCERAMEEGR
DVFAIPGSILDGRSDGCHHLIQEGAKLVTSGKDVLDEFEF

Nucleotide

• Length: 843 bp

>NTDB_id=317151 D7D50_RS08055 WP_120701957.1 1611688..1612530(-) (dprA/cilB/dalA) [Streptococcus koreensis strain KCOM 2890 (=JS71)]
ATGAACAAATATGAACTTTATAAATTAAAGGTTTCTGGCCTGTCTAATCTACAGGTTTTTAACATTGTCAATTACTGGGA
AATGAATGGGGAATGGCCTTCTTTAGAATTAATAGCAAAAATTGCAGGATGTCGCAATCAAACACTTTTTATGGAACGAT
ATATTCGGATTGATGACAAGGTCTTGATGGAGGAGTTCAAAGAGTTTGATTCGATATCCATTATGGATTCAGAATATCCT
GAAGAACTTCTTTGGATGCATAACCCACCTGTTTTGTTGTTTTACTCAGGTAATATTGACCTTCTTAAACATCCCAAAAT
AGCAGTTGTGGGGAGTCGATCCTGCAGTCGCACAGGGATTCAATCTGTCGAAAAAATTATTTATGAGTTAAACAACGAAT
TGATTGTGGTGAGTGGATTAGCCAAGGGGATAGATGCTGCGGCTCATTATGCAGCTATTCGAAATGGAGGAAAAACAATT
GGTGTGATTGGTACTGGGTTAGATGTCTTCTATCCTAGATCTAATAAACAGTTGCAGAAGTACATGAGTGTGAGCCATTT
GGTTTTAACAGAATATGGTCCTGGCCAAAGCCCTCAAAAACACCATTTTCCAGAGCGTAATCGGATTATTGCTGGTCTTT
CTAGAGCGGTGATTGTGGCAGAAGCGCGGATGAGGTCTGGGAGTCTGATCACTTGTGAGCGTGCTATGGAAGAAGGTCGT
GATGTTTTCGCTATTCCAGGTTCTATATTGGATGGTCGTTCTGATGGTTGTCATCACCTCATTCAAGAAGGAGCAAAGCT
TGTGACCAGTGGAAAAGATGTCCTAGATGAGTTTGAATTTTAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-62)

• DNA recombination-mediator protein A (DNA_processg_A) (69-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA/cilB/dalA	Streptococcus mitis SK321	69.286	100	0.693
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	68.571	100	0.686
dprA/cilB/dalA	Streptococcus pneumoniae D39	68.214	100	0.682
dprA/cilB/dalA	Streptococcus pneumoniae R6	68.214	100	0.682
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	68.214	100	0.682
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	68.214	100	0.682
dprA	Streptococcus mutans UA159	57.5	100	0.575
dprA	Lactococcus lactis subsp. cremoris KW2	53.597	99.286	0.532
dprA	Legionella pneumophila strain ERS1305867	39.098	95	0.371