Detailed information NTG0317134

Bioinformatically predicted

Overview

• Name: comB
• Type: Regulator
• Locus tag: D7D50_RS03310
• Genome accession: NZ_CP032620
• Coordinates: 604715..606076 (+)
• Length: 453 a.a.
• NCBI ID: WP_120701456.1
• Uniprot ID: -
• Organism: Streptococcus koreensis strain KCOM 2890 (=JS71)
• Function: transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 599715..611076

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D7D50_RS03295 (D7D50_03295)	-	600793..601065 (+)	273	WP_006595358.1	Veg family protein	-
D7D50_RS03300 (D7D50_03300)	rpsD	601639..602250 (+)	612	WP_003009175.1	30S ribosomal protein S4	-
D7D50_RS03305 (D7D50_03305)	comA	602535..604688 (+)	2154	WP_023027411.1	peptide cleavage/export ABC transporter ComA	Regulator
D7D50_RS03310 (D7D50_03310)	comB	604715..606076 (+)	1362	WP_120701456.1	bacteriocin secretion accessory protein	Regulator
D7D50_RS03315 (D7D50_03315)	-	606113..606649 (-)	537	WP_023027409.1	TetR/AcrR family transcriptional regulator	-
D7D50_RS03320 (D7D50_03320)	-	606785..609580 (+)	2796	WP_120701457.1	YhgE/Pip domain-containing protein	-
D7D50_RS03325 (D7D50_03325)	-	609646..610314 (-)	669	WP_120701458.1	DUF4947 domain-containing protein	-

Sequence

Protein

• Length: 453 a.a.
• Molecular weight: 50811.33 Da
• Isoelectric Point: 6.3549

>NTDB_id=317134 D7D50_RS03310 WP_120701456.1 604715..606076(+) (comB) [Streptococcus koreensis strain KCOM 2890 (=JS71)]
MMNEKYFESAEFYQKRFHNFASLWVVPCFLLLLFVVGFSVFAKKEVTLSSRGTIEATRVIDQIQSTSNSPIQVNHLKENK
EIKKGEILVEYQEDQEKQQGMSLTQQLDLLKKQEEQLKLLKTSIETGESQFTGNEHFGYDQLFKDYQQQIAILQAQAHQQ
NATIASQNASASSSQAEIGQVIQDQEKRLADYHSLKSALLEGRSLDVTHPLYSFYQSYAQQAHGEENAQAQASFIGQLDS
QIQQLEASISNYRIQYAGSGSQQAYSTSLDSQIASLKAQQLSKVGQDLLLLSQQIADLESKVKTQETLLQKTRILAKDEG
VLHLNDETKGASIVAEGTPLAQVYPLIQKEKEVKIVTYIPSKDIATIHVGDRIRFSTQGSKQKPITLEVRISSIASSATR
TEQGNFFKIEGVLRLKDHEAKLLRYGLEGKCVLITGEKSYFSFFVDQFLGAGN

Nucleotide

• Length: 1362 bp

>NTDB_id=317134 D7D50_RS03310 WP_120701456.1 604715..606076(+) (comB) [Streptococcus koreensis strain KCOM 2890 (=JS71)]
ATGATGAACGAAAAATATTTTGAAAGTGCAGAATTCTATCAGAAACGTTTCCATAATTTTGCTAGTTTATGGGTAGTCCC
TTGTTTTCTTTTACTACTTTTTGTTGTGGGATTCTCTGTCTTTGCCAAGAAGGAAGTGACCTTGTCTAGTCGAGGGACAA
TTGAAGCTACGCGCGTGATTGATCAAATCCAATCAACCAGTAATTCTCCCATTCAAGTCAACCATCTAAAGGAAAATAAA
GAGATTAAGAAGGGAGAAATCTTGGTAGAATACCAAGAGGACCAGGAAAAACAACAAGGAATGAGCTTAACGCAACAGCT
AGACCTCTTAAAGAAACAGGAGGAACAATTAAAATTGTTGAAAACTAGCATTGAGACAGGGGAGAGCCAGTTTACAGGAA
ATGAGCATTTTGGTTATGACCAGCTGTTTAAGGATTACCAGCAACAGATAGCGATTCTCCAAGCTCAAGCCCATCAACAA
AATGCAACCATTGCTTCTCAAAATGCCAGTGCAAGTTCCAGTCAAGCAGAAATTGGCCAAGTTATCCAAGACCAAGAGAA
GCGCTTAGCTGATTACCATAGTCTAAAATCAGCTCTACTAGAGGGGAGAAGTCTGGATGTGACTCATCCACTTTACTCTT
TCTACCAGAGTTACGCTCAGCAAGCACACGGAGAGGAAAATGCTCAAGCACAAGCTTCTTTTATTGGCCAGCTGGATAGT
CAAATCCAGCAGTTAGAGGCAAGTATTTCTAATTATCGAATCCAATATGCGGGATCCGGAAGCCAACAAGCTTATTCGAC
CAGTTTAGATAGTCAAATAGCCTCCCTGAAAGCTCAACAACTGAGTAAGGTCGGACAAGATCTTCTGCTTCTTTCTCAGC
AAATCGCAGATCTAGAAAGTAAGGTAAAAACACAAGAAACTCTTCTTCAGAAGACTCGGATTCTAGCGAAGGATGAAGGG
GTGCTTCATTTGAATGATGAAACAAAAGGAGCGAGTATTGTAGCGGAAGGGACTCCTCTGGCTCAAGTTTATCCTCTCAT
TCAGAAAGAAAAAGAAGTCAAGATTGTCACCTATATTCCTTCAAAAGATATAGCCACGATTCATGTGGGAGATCGGATTC
GCTTTAGCACGCAGGGAAGTAAACAAAAACCAATTACGCTAGAAGTCCGTATTAGCTCAATAGCTTCGAGTGCAACTCGG
ACAGAACAAGGCAACTTTTTCAAAATAGAGGGAGTTCTTCGTCTTAAGGATCATGAGGCCAAGCTCCTACGGTACGGTTT
GGAAGGGAAGTGTGTCTTGATTACAGGAGAAAAATCCTACTTCAGTTTCTTTGTGGATCAATTTTTAGGAGCGGGGAACT
AA

Domains

Predicted by InterproScan.

• HlyD family secretion protein (HlyD_3) (319-426)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comB	Streptococcus gordonii str. Challis substr. CH1	54.204	99.779	0.541
comB	Streptococcus mitis SK321	50.223	98.896	0.497
comB	Streptococcus pneumoniae Rx1	50.223	98.896	0.497
comB	Streptococcus pneumoniae R6	50.223	98.896	0.497
comB	Streptococcus pneumoniae D39	50.223	98.896	0.497
comB	Streptococcus mitis NCTC 12261	50.223	98.896	0.497
comB	Streptococcus pneumoniae TIGR4	49.554	98.896	0.49