Detailed information NTG0312333

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: D1O36_RS04545
• Genome accession: NZ_CP031881
• Coordinates: 819720..820559 (+)
• Length: 279 a.a.
• NCBI ID: WP_116920213.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain ST106
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 814720..825559

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D1O36_RS04515 (D1O36_04515)	-	815135..815662 (+)	528	WP_014608250.1	ECF transporter S component	-
D1O36_RS04520 (D1O36_04520)	-	815686..816201 (+)	516	WP_011681082.1	transcription repressor NadR	-
D1O36_RS04525 (D1O36_04525)	-	816296..816985 (+)	690	WP_011681083.1	helix-turn-helix transcriptional regulator	-
D1O36_RS04530 (D1O36_04530)	ylqF	817113..817967 (+)	855	WP_011681084.1	ribosome biogenesis GTPase YlqF	-
D1O36_RS04535 (D1O36_04535)	-	817954..818721 (+)	768	WP_116920212.1	ribonuclease HII	-
D1O36_RS04540 (D1O36_04540)	-	818732..819652 (+)	921	WP_014608255.1	ROK family protein	-
D1O36_RS04545 (D1O36_04545)	dprA	819720..820559 (+)	840	WP_116920213.1	DNA-processing protein DprA	Machinery gene
D1O36_RS04550 (D1O36_04550)	topA	820727..822871 (+)	2145	WP_134973217.1	type I DNA topoisomerase	-
D1O36_RS04555 (D1O36_04555)	-	823024..824199 (-)	1176	WP_134973211.1	IS256-like element IS1191 family transposase	-
D1O36_RS04560 (D1O36_04560)	-	824310..825134 (+)	825	WP_011227157.1	TraX family protein	-

Sequence

Protein

• Length: 279 a.a.
• Molecular weight: 31260.22 Da
• Isoelectric Point: 8.4536

>NTDB_id=312333 D1O36_RS04545 WP_116920213.1 819720..820559(+) (dprA) [Streptococcus thermophilus strain ST106]
MNNFELFKLKAAGLTNLNILNILDYQKNQDKKLSLRDMAVVSKSKNAVLFMEKYKNLDVKQLKEDFQRFPTLSIFDKEYP
IELKHSYNPPVLLFYQGNIDLLSKPKLAVVGARKCSETGKQSVRKIVHELGNAFTIVSGLASGIDTCAHMEALKNRGNTI
AVIGTGLDVYYPKENKALQDYMIKNHLVLTEYGPGEQPLKYHFPERNRIISGLCQGVMVVEAKLRSGSLITCERAMEEGR
DVFVIPGNILDGKSDGCHHLIQEGAKCITTGFDIISEFS

Nucleotide

• Length: 840 bp

>NTDB_id=312333 D1O36_RS04545 WP_116920213.1 819720..820559(+) (dprA) [Streptococcus thermophilus strain ST106]
ATGAATAACTTTGAACTTTTTAAACTAAAAGCTGCTGGATTGACGAATTTAAACATCCTTAACATTTTAGACTATCAAAA
AAATCAAGATAAAAAATTGAGCTTACGTGATATGGCAGTGGTATCTAAGTCTAAAAATGCCGTTCTCTTTATGGAAAAAT
ACAAGAATTTAGATGTTAAGCAGCTTAAGGAAGATTTTCAACGTTTTCCGACCTTATCAATTTTTGATAAGGAGTATCCC
ATTGAGCTGAAACATTCCTATAATCCTCCTGTCCTCCTCTTTTATCAAGGGAATATTGATTTGCTAAGTAAACCCAAGTT
AGCAGTAGTTGGTGCCAGAAAGTGTTCTGAAACAGGCAAACAGTCTGTTCGAAAAATTGTTCATGAACTTGGGAATGCCT
TTACTATTGTAAGTGGCTTAGCGAGTGGAATTGATACTTGTGCTCATATGGAGGCCTTAAAAAATAGAGGTAACACCATT
GCAGTTATCGGGACTGGACTAGACGTATATTATCCTAAAGAAAACAAAGCTTTACAGGACTATATGATTAAAAATCATTT
AGTTCTTACAGAATACGGACCGGGTGAACAGCCACTTAAATACCATTTTCCTGAACGAAATCGGATAATTTCTGGATTGT
GTCAAGGGGTTATGGTGGTTGAAGCCAAGCTTCGCTCGGGAAGTCTTATTACTTGTGAGCGTGCAATGGAAGAAGGAAGA
GATGTTTTCGTCATACCAGGAAATATTTTAGATGGAAAATCGGATGGATGCCATCACCTCATTCAAGAGGGCGCAAAGTG
CATTACTACAGGATTTGACATCATTTCAGAATTTTCATAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (71-269)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-62)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	72.043	100	0.72
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	63.309	99.642	0.631
dprA/cilB/dalA	Streptococcus pneumoniae D39	63.309	99.642	0.631
dprA/cilB/dalA	Streptococcus pneumoniae R6	63.309	99.642	0.631
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	63.309	99.642	0.631
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	62.95	99.642	0.627
dprA/cilB/dalA	Streptococcus mitis SK321	62.95	99.642	0.627
dprA	Lactococcus lactis subsp. cremoris KW2	59.712	99.642	0.595
dprA	Latilactobacillus sakei subsp. sakei 23K	39.382	92.832	0.366