Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   D0B54_RS14630 Genome accession   NZ_CP031704
Coordinates   3262930..3263283 (-) Length   117 a.a.
NCBI ID   WP_117295262.1    Uniprot ID   A0A346N857
Organism   Solimonas sp. K1W22B-7     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3257930..3268283
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D0B54_RS14625 (D0B54_14625) - 3262367..3262915 (-) 549 WP_117292029.1 chemotaxis protein CheW -
  D0B54_RS14630 (D0B54_14630) pilG 3262930..3263283 (-) 354 WP_117295262.1 PleD family two-component system response regulator Regulator
  D0B54_RS14635 (D0B54_14635) gshA 3263453..3264763 (+) 1311 WP_117292030.1 glutamate--cysteine ligase -
  D0B54_RS14640 (D0B54_14640) gshB 3264760..3265707 (+) 948 WP_117292031.1 glutathione synthase -
  D0B54_RS14645 (D0B54_14645) - 3265806..3266363 (+) 558 WP_117292032.1 YqgE/AlgH family protein -
  D0B54_RS14650 (D0B54_14650) ruvX 3266360..3266776 (+) 417 WP_117292033.1 Holliday junction resolvase RuvX -
  D0B54_RS14655 (D0B54_14655) - 3266854..3267810 (+) 957 WP_117292034.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 117 a.a.        Molecular weight: 13220.26 Da        Isoelectric Point: 7.9909

>NTDB_id=310630 D0B54_RS14630 WP_117295262.1 3262930..3263283(-) (pilG) [Solimonas sp. K1W22B-7]
MVIDDSQTIRRTAETLLAREGYQVITAQDGFEALSKVADYQPDLIFIDIMMPRLDGYQACALIKANPKFQRTPVIMLSSK
DGLFDRARGRIVGSDEYLTKPFTRDELLGAVRAHVRK

Nucleotide


Download         Length: 354 bp        

>NTDB_id=310630 D0B54_RS14630 WP_117295262.1 3262930..3263283(-) (pilG) [Solimonas sp. K1W22B-7]
ATGGTGATCGACGATAGCCAGACTATTCGTCGCACCGCAGAAACACTGCTGGCCCGGGAAGGCTACCAGGTGATCACCGC
CCAGGACGGCTTCGAAGCCCTGTCCAAGGTGGCTGATTACCAGCCGGACCTCATCTTCATCGACATCATGATGCCGCGCC
TGGATGGTTATCAGGCCTGCGCCCTGATCAAGGCCAATCCGAAATTCCAGCGCACGCCGGTGATCATGCTGTCCTCCAAG
GACGGCCTGTTCGACCGCGCCCGCGGCCGCATCGTCGGTTCCGACGAGTACCTGACCAAGCCATTCACCCGCGACGAATT
GCTGGGCGCGGTACGCGCGCACGTGCGTAAGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(1-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A346N857

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.652

98.291

0.744
  vicR Streptococcus mutans UA159

45.299

100

0.453
  pilH Synechocystis sp. PCC 6803

42.735

100

0.427
  micA Streptococcus pneumoniae Cp1015

38.462

100

0.385
  chpA Acinetobacter baumannii strain A118

39.823

96.581

0.385
  chiS Vibrio cholerae strain A1552

38.261

98.291

0.376

Multiple sequence alignment