Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsX   Type   Machinery gene
Locus tag   A2J15_RS03820 Genome accession   NZ_CP031611
Coordinates   769430..770005 (-) Length   191 a.a.
NCBI ID   WP_066779512.1    Uniprot ID   A0A424Z0H1
Organism   Campylobacter hepaticus strain HV10     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 764430..775005
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A2J15_RS03810 (A2J15_003810) ctsF 766706..767884 (-) 1179 WP_066779515.1 type II secretion system F family protein Machinery gene
  A2J15_RS03815 (A2J15_003815) ctsE 767881..769428 (-) 1548 WP_066779519.1 GspE/PulE family protein Machinery gene
  A2J15_RS03820 (A2J15_003820) ctsX 769430..770005 (-) 576 WP_066779512.1 transformation system protein Machinery gene
  A2J15_RS03825 (A2J15_003825) ctsP 770009..770617 (-) 609 WP_066779509.1 ATP-binding protein Machinery gene
  A2J15_RS03830 (A2J15_003830) ctsD 770610..772028 (-) 1419 WP_066779506.1 pilus (MSHA type) biogenesis protein MshL Machinery gene
  A2J15_RS03835 (A2J15_003835) ctsR 772006..772302 (-) 297 WP_066779503.1 transformation system protein Machinery gene

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 23062.95 Da        Isoelectric Point: 10.1543

>NTDB_id=307932 A2J15_RS03820 WP_066779512.1 769430..770005(-) (ctsX) [Campylobacter hepaticus strain HV10]
MQERIDELEARYKYFLLKKYLKYLFFVILFFIIGLSFFVFLQKYKQQKNIYLKALEYKINLEQKLAKAQILQEKNKIAKE
RLKPQILKTEEENTKKIEINSRNLNISHLRKSFYENPSYEKALNLANKYFDIKAYKKSIFWALKANELNKEKQDSWLVFA
KAKRALGEEKEAQSVLDAYVNYYGFMEFNAR

Nucleotide


Download         Length: 576 bp        

>NTDB_id=307932 A2J15_RS03820 WP_066779512.1 769430..770005(-) (ctsX) [Campylobacter hepaticus strain HV10]
ATGCAAGAAAGAATTGATGAGCTAGAGGCTAGGTATAAATATTTTTTGCTTAAAAAATATTTAAAATATTTATTTTTTGT
GATTTTATTTTTTATAATAGGGTTGAGTTTTTTTGTGTTTTTGCAAAAATATAAGCAGCAAAAAAATATTTATCTAAAAG
CACTAGAATATAAAATCAATTTAGAGCAAAAGCTTGCTAAGGCGCAAATTTTGCAAGAAAAAAATAAAATTGCTAAAGAA
AGATTAAAGCCACAAATATTAAAAACAGAAGAAGAAAATACGAAAAAGATAGAAATTAATTCACGAAATTTAAATATTTC
GCATTTGCGTAAATCTTTTTATGAAAATCCAAGTTATGAAAAGGCTTTGAATTTGGCAAATAAATATTTTGATATTAAAG
CTTATAAAAAGTCAATATTTTGGGCTTTAAAAGCCAATGAATTAAATAAAGAAAAACAAGATTCTTGGTTGGTTTTTGCA
AAAGCTAAAAGGGCTTTGGGAGAAGAAAAAGAAGCTCAAAGTGTTTTAGATGCTTATGTGAATTATTATGGTTTTATGGA
GTTTAATGCAAGATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A424Z0H1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsX Campylobacter jejuni subsp. jejuni 81-176

69.744

100

0.712

Multiple sequence alignment