Detailed information NTG0307930

Bioinformatically predicted

Overview

• Name: ctsF
• Type: Machinery gene
• Locus tag: A2J15_RS03810
• Genome accession: NZ_CP031611
• Coordinates: 766706..767884 (-)
• Length: 392 a.a.
• NCBI ID: WP_066779515.1
• Uniprot ID: A0A7C9BZ03
• Organism: Campylobacter hepaticus strain HV10
• Function: type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 761706..772884

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A2J15_RS03790 (A2J15_003790)	-	761972..762766 (+)	795	WP_066776459.1	hypothetical protein	-
A2J15_RS03795 (A2J15_003795)	-	762822..763019 (+)	198	WP_066776456.1	hypothetical protein	-
A2J15_RS03800 (A2J15_003800)	-	763040..763720 (+)	681	WP_066776453.1	hypothetical protein	-
A2J15_RS03805 (A2J15_003805)	-	764077..766671 (+)	2595	WP_116980485.1	autotransporter outer membrane beta-barrel domain-containing protein	-
A2J15_RS03810 (A2J15_003810)	ctsF	766706..767884 (-)	1179	WP_066779515.1	type II secretion system F family protein	Machinery gene
A2J15_RS03815 (A2J15_003815)	ctsE	767881..769428 (-)	1548	WP_066779519.1	GspE/PulE family protein	Machinery gene
A2J15_RS03820 (A2J15_003820)	ctsX	769430..770005 (-)	576	WP_066779512.1	transformation system protein	Machinery gene
A2J15_RS03825 (A2J15_003825)	ctsP	770009..770617 (-)	609	WP_066779509.1	ATP-binding protein	Machinery gene
A2J15_RS03830 (A2J15_003830)	ctsD	770610..772028 (-)	1419	WP_066779506.1	pilus (MSHA type) biogenesis protein MshL	Machinery gene
A2J15_RS03835 (A2J15_003835)	ctsR	772006..772302 (-)	297	WP_066779503.1	transformation system protein	Machinery gene

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 45935.90 Da
• Isoelectric Point: 9.8923

>NTDB_id=307930 A2J15_RS03810 WP_066779515.1 766706..767884(-) (ctsF) [Campylobacter hepaticus strain HV10]
MKFYEIEFLKNNHSYKQIIRAKNLNSAQAKALSRNWKIIHIQEFQKFHFVRLKGENFIFFFKELALLCEAGLSVQEGIKQ
IYLARSCKIIKRVLDNLILAQNLNQAFKNAYFGLNSAELALIHMAENTGKISEVFRQIASLRQKSMENKKQIKKALRYPI
LVFLSTIGAFLFLMLFVMPNFKDWFESLDVELPLITHIMLQSYNFLKIYGVVFLAFFIFLFFTILLCYKYFDSFALYCDF
LFLKLPLFSRLILYNQNHYFFIVFSLLLKSGISISKAFYLASSGLGNRFLMLKYQKILVLLDGGFELSQAFKQMYIVDSL
VFSMLNIAMKSAKLELLSEEIAKYYEQKSQNIMEQFLVLLEPVMTLFVAFLVLFLALGIFLPMWELSAKMHF

Nucleotide

• Length: 1179 bp

>NTDB_id=307930 A2J15_RS03810 WP_066779515.1 766706..767884(-) (ctsF) [Campylobacter hepaticus strain HV10]
ATGAAATTTTATGAGATAGAATTTCTTAAAAATAATCACTCCTATAAACAAATCATAAGGGCTAAAAATTTAAATAGTGC
TCAAGCAAAAGCCTTGTCTAGGAATTGGAAAATCATACATATTCAAGAATTTCAAAAGTTTCATTTTGTAAGATTAAAAG
GTGAAAATTTTATATTCTTTTTTAAGGAATTGGCTTTATTGTGTGAAGCTGGTTTAAGTGTTCAAGAGGGTATTAAACAA
ATATATCTTGCGCGTTCTTGTAAAATTATAAAAAGGGTATTAGATAATTTAATTTTAGCACAAAATTTAAATCAAGCTTT
TAAAAATGCTTATTTTGGACTAAACTCAGCAGAATTAGCTTTAATCCATATGGCTGAAAATACAGGAAAAATAAGTGAAG
TTTTTAGACAAATTGCTAGTCTTAGGCAAAAAAGTATGGAGAATAAAAAACAAATTAAAAAAGCTTTAAGATATCCTATT
TTAGTTTTTTTAAGTACCATTGGGGCATTTTTATTTTTAATGCTTTTTGTGATGCCAAATTTTAAAGATTGGTTTGAAAG
TTTGGATGTGGAATTGCCACTTATTACGCATATCATGCTACAAAGTTATAATTTTTTAAAAATTTATGGAGTAGTGTTTC
TTGCATTTTTTATTTTTTTATTTTTTACAATACTATTGTGTTATAAATATTTTGATTCTTTTGCATTGTATTGCGATTTT
TTATTTTTAAAACTACCTTTATTTTCTCGTTTGATTTTATATAATCAAAACCATTATTTTTTTATCGTTTTTTCTCTACT
TTTAAAGAGTGGAATTTCCATTTCCAAAGCTTTTTATCTAGCTAGTTCAGGGCTTGGAAATAGGTTTTTGATGTTAAAAT
ATCAAAAAATTTTAGTTTTATTAGATGGTGGTTTTGAATTAAGTCAAGCTTTTAAACAAATGTATATTGTGGATTCTTTG
GTCTTTTCTATGCTTAATATTGCCATGAAAAGTGCTAAATTAGAGCTTTTAAGCGAAGAAATTGCTAAGTATTATGAGCA
AAAAAGTCAAAATATCATGGAGCAATTTTTAGTTTTATTAGAACCTGTAATGACTTTATTTGTAGCTTTTTTGGTTTTAT
TTTTAGCTTTGGGCATATTTTTGCCTATGTGGGAGCTTAGTGCTAAAATGCATTTTTAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein F (T2SSF) (261-382)

• Type II secretion system (T2SS), protein F (T2SSF) (60-179)

3D structure

• AlphaFold DB: A0A7C9BZ03

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ctsF	Campylobacter jejuni subsp. jejuni 81-176	69.898	100	0.699