Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   AB849_RS11595 Genome accession   NZ_CP036487
Coordinates   2276360..2276980 (+) Length   206 a.a.
NCBI ID   WP_049720079.1    Uniprot ID   A0ABS0QEU1
Organism   Thermoactinomyces vulgaris strain CDF     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2271360..2281980
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB849_RS11580 (AB849_011580) - 2272291..2272920 (-) 630 WP_049720082.1 TetR/AcrR family transcriptional regulator -
  AB849_RS11585 (AB849_011585) - 2273666..2274916 (-) 1251 WP_049720081.1 NCS2 family permease -
  AB849_RS11590 (AB849_011590) - 2275166..2276242 (+) 1077 WP_236533604.1 tyrosine-type recombinase/integrase -
  AB849_RS11595 (AB849_011595) dinR/lexA 2276360..2276980 (+) 621 WP_049720079.1 transcriptional repressor LexA Regulator
  AB849_RS11600 (AB849_011600) - 2277075..2278268 (-) 1194 WP_049720078.1 pyridoxal phosphate-dependent aminotransferase -
  AB849_RS11605 (AB849_011605) - 2278340..2279536 (-) 1197 WP_049720077.1 acetate/propionate family kinase -
  AB849_RS11610 (AB849_011610) - 2279533..2280423 (-) 891 WP_276319273.1 3-hydroxyacyl-CoA dehydrogenase family protein -
  AB849_RS11615 (AB849_011615) - 2280445..2281953 (-) 1509 WP_049720075.1 AAA family ATPase -

Sequence

Protein


Download         Length: 206 a.a.        Molecular weight: 22842.45 Da        Isoelectric Point: 6.8878

>NTDB_id=307930 AB849_RS11595 WP_049720079.1 2276360..2276980(+) (dinR/lexA) [Thermoactinomyces vulgaris strain CDF]
MDKLSPRQKAILDYIQKEVAEKGYPPSVREIGEAVGLASSSTVHGHLARLEKKGYIRRDPTKPRAIELLHRPEIYTKGVE
TVMVPLVGKVTAGEPITAIENIEDYYPLPRRLAGQDDPVFLLSVRGDSMINAGILDGDYVVVRQQPTAENGDIVVAMTPE
GEATVKRFFKEKDHIRLQPENDTLSPILLPSVKILGKVISLIREVL

Nucleotide


Download         Length: 621 bp        

>NTDB_id=307930 AB849_RS11595 WP_049720079.1 2276360..2276980(+) (dinR/lexA) [Thermoactinomyces vulgaris strain CDF]
GTGGACAAACTCTCACCCAGGCAAAAAGCCATTTTAGACTATATCCAAAAAGAAGTGGCCGAAAAAGGATACCCGCCTTC
CGTTCGGGAAATCGGCGAAGCCGTGGGTCTTGCCTCCAGTTCCACCGTGCATGGACACCTGGCTCGTCTTGAAAAAAAGG
GATATATCCGGCGTGACCCGACCAAACCCCGTGCCATCGAGCTTTTACATCGTCCTGAAATCTACACCAAAGGCGTGGAA
ACCGTCATGGTCCCGCTGGTCGGTAAAGTGACGGCGGGCGAGCCGATTACAGCCATTGAAAACATTGAAGATTATTATCC
GCTTCCAAGACGGCTCGCCGGACAAGATGATCCCGTGTTTCTCTTATCCGTGCGCGGGGACAGCATGATCAATGCCGGAA
TTTTGGACGGGGATTATGTGGTCGTGCGTCAGCAACCGACCGCCGAAAACGGCGACATCGTCGTGGCCATGACCCCTGAA
GGGGAAGCAACGGTCAAACGTTTTTTTAAGGAAAAAGATCATATTCGTTTGCAACCTGAAAATGACACCCTTTCGCCGAT
CTTATTGCCCAGTGTGAAAATTCTCGGCAAAGTGATCAGCTTGATTCGTGAAGTTTTGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(85-199)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

67.805

99.515

0.675

Multiple sequence alignment