Detailed information NTG0306327

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: DK237_RS00800
• Genome accession: NZ_CP031377
• Coordinates: 125418..125852 (+)
• Length: 144 a.a.
• NCBI ID: WP_029750050.1
• Uniprot ID: -
• Organism: Streptococcus suis strain ISU2614
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 120418..130852

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DK237_RS00765 (DK237_00785)	-	121160..121525 (+)	366	WP_002936568.1	DUF1033 family protein	-
DK237_RS00770 (DK237_00790)	-	121560..122510 (-)	951	WP_002936565.1	S66 peptidase family protein	-
DK237_RS00775 (DK237_00795)	comYA	122596..123546 (+)	951	WP_053861401.1	competence type IV pilus ATPase ComGA	Machinery gene
DK237_RS00780 (DK237_00800)	comYB	123458..124495 (+)	1038	WP_043032925.1	competence type IV pilus assembly protein ComGB	Machinery gene
DK237_RS00785 (DK237_00805)	comYC	124497..124778 (+)	282	WP_011921720.1	competence type IV pilus major pilin ComGC	Machinery gene
DK237_RS00790 (DK237_00810)	comGD	124759..125166 (+)	408	WP_024394702.1	competence type IV pilus minor pilin ComGD	-
DK237_RS00795 (DK237_00815)	comYE	125138..125431 (+)	294	WP_024394703.1	competence type IV pilus minor pilin ComGE	Machinery gene
DK237_RS00800 (DK237_00820)	comGF/cglF	125418..125852 (+)	435	WP_029750050.1	competence type IV pilus minor pilin ComGF	Machinery gene
DK237_RS00805 (DK237_00825)	comGG	125830..126240 (+)	411	WP_024394705.1	competence type IV pilus minor pilin ComGG	-
DK237_RS00810 (DK237_00830)	comYH	126297..127250 (+)	954	WP_024394706.1	class I SAM-dependent methyltransferase	Machinery gene
DK237_RS00815 (DK237_00835)	-	127300..128487 (+)	1188	WP_014637319.1	acetate kinase	-
DK237_RS00820 (DK237_00840)	-	128802..129353 (+)	552	WP_014636756.1	folate family ECF transporter S component	-
DK237_RS00825 (DK237_00845)	-	129407..130663 (+)	1257	WP_024394707.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16507.85 Da
• Isoelectric Point: 8.8193

>NTDB_id=306327 DK237_RS00800 WP_029750050.1 125418..125852(+) (comGF/cglF) [Streptococcus suis strain ISU2614]
MLKSKIPAFTLLECLVALVILSGSLLVFEGLSKLLIQEAHYQRQSVQKEWLVFSSQLRSEWDRSELVKVENGKVYVDKGG
QSLAFGKSRSDDFRKTNDRGQGYQPMLYQVDSAAISQENQLVRIDFSFKNGEERTFIYAFKEKS

Nucleotide

• Length: 435 bp

>NTDB_id=306327 DK237_RS00800 WP_029750050.1 125418..125852(+) (comGF/cglF) [Streptococcus suis strain ISU2614]
TTGTTAAAAAGTAAAATTCCCGCTTTTACTCTCCTGGAATGCTTGGTAGCCTTAGTCATCCTATCAGGAAGTCTTCTGGT
CTTTGAAGGCTTGTCAAAGTTGTTGATTCAAGAAGCACATTACCAACGTCAATCTGTCCAAAAGGAGTGGCTGGTATTTT
CTAGTCAGTTGCGGTCAGAGTGGGACCGGTCGGAATTGGTCAAGGTTGAAAATGGCAAGGTCTATGTTGATAAAGGTGGT
CAGTCGTTGGCCTTTGGTAAGTCACGATCGGATGATTTTCGGAAAACAAATGACAGGGGACAGGGCTACCAGCCCATGCT
CTATCAGGTGGACAGTGCAGCTATTTCCCAAGAAAACCAGCTGGTGCGTATCGACTTTAGCTTTAAAAACGGAGAGGAGC
GGACCTTTATCTATGCTTTTAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (36-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae TIGR4	56.738	97.917	0.556
comGF/cglF	Streptococcus pneumoniae Rx1	56.738	97.917	0.556
comGF/cglF	Streptococcus pneumoniae D39	56.738	97.917	0.556
comGF/cglF	Streptococcus pneumoniae R6	56.738	97.917	0.556
comGF/cglF	Streptococcus mitis NCTC 12261	57.463	93.056	0.535
comGF/cglF	Streptococcus mitis SK321	54.478	93.056	0.507
comYF	Streptococcus mutans UA140	50.694	100	0.507
comYF	Streptococcus mutans UA159	50	100	0.5
comGF	Lactococcus lactis subsp. cremoris KW2	46.099	97.917	0.451