Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | DK237_RS00810 | Genome accession | NZ_CP031377 |
| Coordinates | 126297..127250 (+) | Length | 317 a.a. |
| NCBI ID | WP_024394706.1 | Uniprot ID | A0A0Z8SW51 |
| Organism | Streptococcus suis strain ISU2614 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 121297..132250
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DK237_RS00770 (DK237_00790) | - | 121560..122510 (-) | 951 | WP_002936565.1 | S66 peptidase family protein | - |
| DK237_RS00775 (DK237_00795) | comYA | 122596..123546 (+) | 951 | WP_053861401.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| DK237_RS00780 (DK237_00800) | comYB | 123458..124495 (+) | 1038 | WP_043032925.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| DK237_RS00785 (DK237_00805) | comYC | 124497..124778 (+) | 282 | WP_011921720.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| DK237_RS00790 (DK237_00810) | comGD | 124759..125166 (+) | 408 | WP_024394702.1 | competence type IV pilus minor pilin ComGD | - |
| DK237_RS00795 (DK237_00815) | comYE | 125138..125431 (+) | 294 | WP_024394703.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| DK237_RS00800 (DK237_00820) | comGF/cglF | 125418..125852 (+) | 435 | WP_029750050.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| DK237_RS00805 (DK237_00825) | comGG | 125830..126240 (+) | 411 | WP_024394705.1 | competence type IV pilus minor pilin ComGG | - |
| DK237_RS00810 (DK237_00830) | comYH | 126297..127250 (+) | 954 | WP_024394706.1 | class I SAM-dependent methyltransferase | Machinery gene |
| DK237_RS00815 (DK237_00835) | - | 127300..128487 (+) | 1188 | WP_014637319.1 | acetate kinase | - |
| DK237_RS00820 (DK237_00840) | - | 128802..129353 (+) | 552 | WP_014636756.1 | folate family ECF transporter S component | - |
| DK237_RS00825 (DK237_00845) | - | 129407..130663 (+) | 1257 | WP_024394707.1 | folylpolyglutamate synthase/dihydrofolate synthase family protein | - |
| DK237_RS00830 (DK237_00850) | pepA | 130708..131769 (-) | 1062 | WP_002936538.1 | glutamyl aminopeptidase | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35744.84 Da Isoelectric Point: 4.5053
>NTDB_id=306328 DK237_RS00810 WP_024394706.1 126297..127250(+) (comYH) [Streptococcus suis strain ISU2614]
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVANQHETDLVVNNNKTLKQLDLTKEEWRRAYQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLVPTQKVTVLEIGSGTGNLAQTILNASQKELDYLGIEVDDLLIDLSASIADVMQAD
ISFAQGDAVRPQILKESQVILGDLPIGYYPDDQIASRYQVASPNEHTYAHHLLMEQSLKYLEKNGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFVLQKKAARSLTPFVYPLQSLQEPEAIQKFMLNFKNWKQENAI
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVANQHETDLVVNNNKTLKQLDLTKEEWRRAYQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLVPTQKVTVLEIGSGTGNLAQTILNASQKELDYLGIEVDDLLIDLSASIADVMQAD
ISFAQGDAVRPQILKESQVILGDLPIGYYPDDQIASRYQVASPNEHTYAHHLLMEQSLKYLEKNGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFVLQKKAARSLTPFVYPLQSLQEPEAIQKFMLNFKNWKQENAI
Nucleotide
Download Length: 954 bp
>NTDB_id=306328 DK237_RS00810 WP_024394706.1 126297..127250(+) (comYH) [Streptococcus suis strain ISU2614]
ATGAATTTTGAAAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTAGGTACCAA
TATCTATGATGCCATGATTGAGCAAAATGCTGCTTACGTAGCTAATCAGCATGAGACGGACCTTGTTGTCAATAATAACA
AGACCTTGAAACAACTAGATTTAACCAAGGAAGAATGGCGTCGTGCCTATCAATTCTTGCTCATCAAGGCCAATCAGACT
GAACCCATGCAGTATAATCACCAGTTCACACCAGACTCTATCGGATTTATCCTATCTTTTCTAGTAGACCAATTGGTGCC
GACTCAAAAGGTGACGGTTCTGGAAATTGGTTCGGGGACAGGCAATCTAGCTCAGACCATTCTCAACGCCAGCCAGAAAG
AATTGGATTACTTGGGGATCGAAGTGGACGACCTCTTGATTGATTTGTCGGCAAGTATTGCGGATGTCATGCAGGCAGAT
ATTTCTTTTGCTCAGGGAGATGCGGTACGTCCGCAGATTTTGAAGGAAAGTCAAGTAATTTTGGGAGATTTGCCTATTGG
CTACTATCCAGATGACCAGATTGCTAGCCGCTATCAGGTCGCCAGCCCAAATGAACATACCTACGCCCATCATTTACTCA
TGGAACAATCCCTCAAATATCTGGAAAAAAATGGTTTTGCGATTTTGTTGGCTCCAAATGATTTATTGACTAGTCCGCAA
AGCGATTTGCTGAAAGGTTGGTTACAGGAGCAAGCCAATATTGTTGCCATGATTGCCCTACCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGATCATTGACGCCGTTTGTTTATCCCTTACAAA
GTCTTCAAGAACCAGAAGCTATTCAGAAGTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA
ATGAATTTTGAAAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTAGGTACCAA
TATCTATGATGCCATGATTGAGCAAAATGCTGCTTACGTAGCTAATCAGCATGAGACGGACCTTGTTGTCAATAATAACA
AGACCTTGAAACAACTAGATTTAACCAAGGAAGAATGGCGTCGTGCCTATCAATTCTTGCTCATCAAGGCCAATCAGACT
GAACCCATGCAGTATAATCACCAGTTCACACCAGACTCTATCGGATTTATCCTATCTTTTCTAGTAGACCAATTGGTGCC
GACTCAAAAGGTGACGGTTCTGGAAATTGGTTCGGGGACAGGCAATCTAGCTCAGACCATTCTCAACGCCAGCCAGAAAG
AATTGGATTACTTGGGGATCGAAGTGGACGACCTCTTGATTGATTTGTCGGCAAGTATTGCGGATGTCATGCAGGCAGAT
ATTTCTTTTGCTCAGGGAGATGCGGTACGTCCGCAGATTTTGAAGGAAAGTCAAGTAATTTTGGGAGATTTGCCTATTGG
CTACTATCCAGATGACCAGATTGCTAGCCGCTATCAGGTCGCCAGCCCAAATGAACATACCTACGCCCATCATTTACTCA
TGGAACAATCCCTCAAATATCTGGAAAAAAATGGTTTTGCGATTTTGTTGGCTCCAAATGATTTATTGACTAGTCCGCAA
AGCGATTTGCTGAAAGGTTGGTTACAGGAGCAAGCCAATATTGTTGCCATGATTGCCCTACCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGATCATTGACGCCGTTTGTTTATCCCTTACAAA
GTCTTCAAGAACCAGAAGCTATTCAGAAGTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
60.759 |
99.685 |
0.606 |
| comYH | Streptococcus mutans UA159 |
60.443 |
99.685 |
0.603 |