Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | DV378_RS05025 | Genome accession | NZ_CP031249 |
| Coordinates | 1013329..1013778 (-) | Length | 149 a.a. |
| NCBI ID | WP_005691824.1 | Uniprot ID | A0A2S9R750 |
| Organism | Haemophilus influenzae strain M15895 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1008329..1018778
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DV378_RS05005 | rho | 1008716..1009978 (+) | 1263 | WP_005629550.1 | transcription termination factor Rho | - |
| DV378_RS05010 | pilD | 1010032..1010724 (-) | 693 | WP_050948983.1 | A24 family peptidase | Machinery gene |
| DV378_RS05015 | pilC | 1010721..1011941 (-) | 1221 | WP_050948984.1 | type II secretion system F family protein | Machinery gene |
| DV378_RS05020 | pilB | 1011938..1013332 (-) | 1395 | WP_005691826.1 | GspE/PulE family protein | Machinery gene |
| DV378_RS05025 | pilA | 1013329..1013778 (-) | 450 | WP_005691824.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| DV378_RS05030 | ampD | 1013893..1014447 (+) | 555 | WP_005691822.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| DV378_RS05035 | corC | 1015079..1015978 (+) | 900 | WP_114934782.1 | CNNM family magnesium/cobalt transport protein CorC | - |
| DV378_RS05040 | lnt | 1016001..1017530 (+) | 1530 | WP_076773244.1 | apolipoprotein N-acyltransferase | - |
| DV378_RS05045 | rsmE | 1017580..1018317 (+) | 738 | WP_005691816.1 | 16S rRNA (uracil(1498)-N(3))-methyltransferase | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 15409.89 Da Isoelectric Point: 9.3908
>NTDB_id=304924 DV378_RS05025 WP_005691824.1 1013329..1013778(-) (pilA) [Haemophilus influenzae strain M15895]
MKLTTLQTLKKGFTLIELMIVIAIIAILATIAIPSYQNYTKKAAVSELLQASAPYKADVELCVYSTGKPSTCSGGSNGIA
ADITTAKGYVASVKTQSGGITVKGNGTLANMEYILQAKGNATAGVTWTTTCKGTDASLFPANFCGSVTK
MKLTTLQTLKKGFTLIELMIVIAIIAILATIAIPSYQNYTKKAAVSELLQASAPYKADVELCVYSTGKPSTCSGGSNGIA
ADITTAKGYVASVKTQSGGITVKGNGTLANMEYILQAKGNATAGVTWTTTCKGTDASLFPANFCGSVTK
Nucleotide
Download Length: 450 bp
>NTDB_id=304924 DV378_RS05025 WP_005691824.1 1013329..1013778(-) (pilA) [Haemophilus influenzae strain M15895]
ATGAAATTAACAACACTGCAAACCTTGAAAAAAGGGTTTACATTAATCGAGCTAATGATTGTGATTGCAATTATTGCTAT
TTTAGCCACTATCGCAATTCCTTCTTATCAAAATTATACCAAAAAAGCTGCGGTATCCGAATTACTGCAAGCTTCTGCGC
CTTATAAGGCTGATGTGGAATTATGCGTTTATAGCACAGGCAAACCTTCTACTTGCTCAGGAGGAAGCAATGGAATTGCA
GCTGATATTACAACAGCAAAAGGCTATGTAGCCTCAGTGAAAACTCAATCAGGTGGTATTACAGTAAAAGGGAATGGCAC
ATTGGCAAATATGGAATATATTTTGCAAGCTAAAGGTAATGCTACAGCAGGTGTAACTTGGACAACAACCTGCAAAGGAA
CGGATGCCTCTTTATTTCCAGCAAATTTTTGCGGAAGTGTCACAAAATGA
ATGAAATTAACAACACTGCAAACCTTGAAAAAAGGGTTTACATTAATCGAGCTAATGATTGTGATTGCAATTATTGCTAT
TTTAGCCACTATCGCAATTCCTTCTTATCAAAATTATACCAAAAAAGCTGCGGTATCCGAATTACTGCAAGCTTCTGCGC
CTTATAAGGCTGATGTGGAATTATGCGTTTATAGCACAGGCAAACCTTCTACTTGCTCAGGAGGAAGCAATGGAATTGCA
GCTGATATTACAACAGCAAAAGGCTATGTAGCCTCAGTGAAAACTCAATCAGGTGGTATTACAGTAAAAGGGAATGGCAC
ATTGGCAAATATGGAATATATTTTGCAAGCTAAAGGTAATGCTACAGCAGGTGTAACTTGGACAACAACCTGCAAAGGAA
CGGATGCCTCTTTATTTCCAGCAAATTTTTGCGGAAGTGTCACAAAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Haemophilus influenzae Rd KW20 |
93.289 |
100 |
0.933 |
| pilA | Haemophilus influenzae 86-028NP |
87.919 |
100 |
0.879 |
| pilA | Glaesserella parasuis strain SC1401 |
57.047 |
100 |
0.57 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
39.189 |
99.329 |
0.389 |
| pilA | Vibrio campbellii strain DS40M4 |
39.716 |
94.631 |
0.376 |