Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | DT536_RS06510 | Genome accession | NZ_CP031011 |
| Coordinates | 1354701..1355228 (+) | Length | 175 a.a. |
| NCBI ID | WP_058870417.1 | Uniprot ID | - |
| Organism | Acinetobacter johnsonii strain LXL_C1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1349701..1360228
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DT536_RS06495 (DT536_06495) | pilM | 1352268..1353326 (+) | 1059 | WP_058870420.1 | pilus assembly protein PilM | Machinery gene |
| DT536_RS06500 (DT536_06500) | comN | 1353326..1353982 (+) | 657 | WP_058870419.1 | PilN domain-containing protein | Machinery gene |
| DT536_RS06505 (DT536_06505) | pilO | 1353979..1354701 (+) | 723 | WP_058870418.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| DT536_RS06510 (DT536_06510) | pilP | 1354701..1355228 (+) | 528 | WP_058870417.1 | pilus assembly protein PilP | Machinery gene |
| DT536_RS06515 (DT536_06515) | pilQ | 1355248..1357311 (+) | 2064 | WP_058870416.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| DT536_RS06520 (DT536_06520) | aroK | 1357349..1357882 (+) | 534 | WP_004978075.1 | shikimate kinase AroK | - |
| DT536_RS06525 (DT536_06525) | aroB | 1357913..1358998 (+) | 1086 | WP_058870415.1 | 3-dehydroquinate synthase | - |
| DT536_RS06530 (DT536_06530) | - | 1359006..1359845 (+) | 840 | WP_058870414.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19352.51 Da Isoelectric Point: 6.7121
>NTDB_id=302838 DT536_RS06510 WP_058870417.1 1354701..1355228(+) (pilP) [Acinetobacter johnsonii strain LXL_C1]
MKYQNLMLSLCVGLFLVGCDSRIDAVNMQMAEIRNQPPLPIEPAPDFPPVPTFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNLSRQLQPLESYAIESLNMKGSMHGQNGQILALIQTPDGEIERVQRGSYLGMNHGRVINITATQIDLIEIIPDGREG
YVERPRSLVLIGPAP
MKYQNLMLSLCVGLFLVGCDSRIDAVNMQMAEIRNQPPLPIEPAPDFPPVPTFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNLSRQLQPLESYAIESLNMKGSMHGQNGQILALIQTPDGEIERVQRGSYLGMNHGRVINITATQIDLIEIIPDGREG
YVERPRSLVLIGPAP
Nucleotide
Download Length: 528 bp
>NTDB_id=302838 DT536_RS06510 WP_058870417.1 1354701..1355228(+) (pilP) [Acinetobacter johnsonii strain LXL_C1]
ATGAAATATCAAAATCTCATGCTTAGTCTCTGCGTAGGACTATTCCTTGTCGGTTGTGATTCACGTATTGATGCGGTCAA
TATGCAAATGGCTGAAATTCGTAATCAACCCCCATTGCCGATTGAGCCTGCGCCAGATTTTCCACCTGTCCCGACTTTTA
ATTATGCTGCGCATCAATTAAAGAGCCCGTTTATGCCAAGCTCGTTAGCGGCTGAACTGAAGATTATGGCTGGGAAACGT
GTCTATCCAAACTTATCTCGCCAATTACAACCCTTGGAAAGTTATGCGATTGAATCGCTGAACATGAAAGGCAGCATGCA
TGGACAAAATGGACAAATTTTGGCGTTGATTCAAACACCTGATGGTGAAATTGAACGCGTGCAGCGTGGTAGTTATTTGG
GGATGAATCATGGTCGTGTGATTAATATCACCGCCACACAAATTGATTTGATTGAAATTATTCCGGATGGGCGTGAGGGC
TATGTCGAGCGCCCGAGAAGCCTAGTATTAATTGGGCCGGCGCCTTAA
ATGAAATATCAAAATCTCATGCTTAGTCTCTGCGTAGGACTATTCCTTGTCGGTTGTGATTCACGTATTGATGCGGTCAA
TATGCAAATGGCTGAAATTCGTAATCAACCCCCATTGCCGATTGAGCCTGCGCCAGATTTTCCACCTGTCCCGACTTTTA
ATTATGCTGCGCATCAATTAAAGAGCCCGTTTATGCCAAGCTCGTTAGCGGCTGAACTGAAGATTATGGCTGGGAAACGT
GTCTATCCAAACTTATCTCGCCAATTACAACCCTTGGAAAGTTATGCGATTGAATCGCTGAACATGAAAGGCAGCATGCA
TGGACAAAATGGACAAATTTTGGCGTTGATTCAAACACCTGATGGTGAAATTGAACGCGTGCAGCGTGGTAGTTATTTGG
GGATGAATCATGGTCGTGTGATTAATATCACCGCCACACAAATTGATTTGATTGAAATTATTCCGGATGGGCGTGAGGGC
TATGTCGAGCGCCCGAGAAGCCTAGTATTAATTGGGCCGGCGCCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
76.571 |
100 |
0.766 |
| comL | Acinetobacter baylyi ADP1 |
70.857 |
100 |
0.709 |