Detailed information NTG0300426

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: DQ228_RS04620
• Genome accession: NZ_CP030250
• Coordinates: 885122..885961 (+)
• Length: 279 a.a.
• NCBI ID: WP_232979794.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain CS20
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 880122..890961

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQ228_RS04590	-	880537..881064 (+)	528	WP_041827017.1	ECF transporter S component	-
DQ228_RS04595	-	881088..881603 (+)	516	WP_014621521.1	transcription repressor NadR	-
DQ228_RS04600	-	881698..882387 (+)	690	WP_014621522.1	XRE family transcriptional regulator	-
DQ228_RS04605	ylqF	882515..883369 (+)	855	WP_002950602.1	ribosome biogenesis GTPase YlqF	-
DQ228_RS04610	-	883356..884123 (+)	768	WP_232979793.1	ribonuclease HII	-
DQ228_RS04615	-	884134..885054 (+)	921	WP_011681085.1	ROK family protein	-
DQ228_RS04620	dprA	885122..885961 (+)	840	WP_232979794.1	DNA-processing protein DprA	Machinery gene
DQ228_RS04625	topA	886129..888273 (+)	2145	WP_232979795.1	type I DNA topoisomerase	-
DQ228_RS04630	-	888391..889215 (+)	825	WP_014608257.1	TraX family protein	-
DQ228_RS04635	-	889251..889910 (+)	660	WP_011227158.1	response regulator transcription factor	-

Sequence

Protein

• Length: 279 a.a.
• Molecular weight: 31295.22 Da
• Isoelectric Point: 8.6571

>NTDB_id=300426 DQ228_RS04620 WP_232979794.1 885122..885961(+) (dprA) [Streptococcus thermophilus strain CS20]
MNNFELFKLKAAGLTNLNILNILDYQKNQDKKLSLRDMAVVSKSKNAVLFMEKYKNLDVKQLKEDFQRFPTLSIFDKEYP
IELKHSYNPPVLLFYQGNIDLLSKPKLAVVGARKCSETGKQSVRKIVHELGNAFTIVSGLARGIDTCAHMEALKNKGNTI
AVIGTGLDVYYPKENKALQDYMAKNHLVLTEYGPGEQPLKYHYPERNRIISGLCQGVMVFEAKLRSGSLITCERAMEEGR
DVFAIPGNILDGKSDGCHHLIQEGAKCITTGFDIISEFS

Nucleotide

• Length: 840 bp

>NTDB_id=300426 DQ228_RS04620 WP_232979794.1 885122..885961(+) (dprA) [Streptococcus thermophilus strain CS20]
ATGAATAACTTTGAACTTTTTAAACTAAAAGCTGCTGGATTGACGAATTTAAACATCCTTAACATTTTAGACTATCAAAA
AAATCAAGATAAAAAATTGAGCTTACGTGATATGGCAGTGGTATCTAAGTCTAAAAATGCCGTTCTCTTTATGGAAAAAT
ACAAGAATTTGGATGTTAAGCAGCTTAAGGAAGATTTTCAACGTTTTCCGACCTTATCAATTTTTGATAAGGAGTATCCC
ATTGAGCTGAAACATTCCTATAATCCTCCTGTTCTCCTCTTTTATCAAGGGAATATTGATTTGCTAAGTAAACCCAAGTT
AGCAGTAGTTGGTGCCAGAAAGTGTTCTGAAACAGGCAAACAGTCTGTTCGAAAAATTGTTCATGAACTTGGGAATGCCT
TTACTATTGTAAGTGGCTTGGCGCGTGGAATTGATACTTGTGCTCATATGGAGGCCTTAAAAAATAAAGGTAACACCATT
GCAGTTATCGGGACTGGGCTAGACGTATATTATCCTAAAGAAAACAAAGCTTTACAGGACTATATGGCTAAAAATCATTT
AGTTCTTACAGAATACGGACCGGGTGAACAGCCACTTAAATACCATTATCCTGAACGAAATCGGATAATTTCTGGATTGT
GTCAAGGGGTTATGGTGTTTGAAGCCAAGCTTCGCTCGGGAAGTCTTATTACTTGTGAGCGTGCAATGGAAGAAGGAAGA
GATGTTTTCGCCATACCAGGAAATATTTTAGATGGAAAATCGGATGGATGCCATCACCTCATTCAAGAGGGCGCAAAGTG
CATTACTACAGGATTTGACATCATTTCAGAATTTTCATAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (71-269)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-62)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	72.043	100	0.72
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	63.309	99.642	0.631
dprA/cilB/dalA	Streptococcus pneumoniae D39	63.309	99.642	0.631
dprA/cilB/dalA	Streptococcus pneumoniae R6	63.309	99.642	0.631
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	63.309	99.642	0.631
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	62.95	99.642	0.627
dprA/cilB/dalA	Streptococcus mitis SK321	62.95	99.642	0.627
dprA	Lactococcus lactis subsp. cremoris KW2	60.072	99.642	0.599
dprA	Latilactobacillus sakei subsp. sakei 23K	39.768	92.832	0.369