Detailed information NTG0299416

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: DP111_RS00835
• Genome accession: NZ_CP030124
• Coordinates: 128906..129340 (+)
• Length: 144 a.a.
• NCBI ID: WP_029750050.1
• Uniprot ID: -
• Organism: Streptococcus suis strain SH1510
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 123906..134340

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DP111_RS00800 (DP111_00800)	-	124648..125013 (+)	366	WP_002936568.1	DUF1033 family protein	-
DP111_RS00805 (DP111_00805)	-	125048..125998 (-)	951	WP_024394700.1	S66 peptidase family protein	-
DP111_RS00810 (DP111_00810)	comYA	126084..127034 (+)	951	WP_014637312.1	competence type IV pilus ATPase ComGA	Machinery gene
DP111_RS00815 (DP111_00815)	comYB	126946..127983 (+)	1038	WP_043032925.1	competence type IV pilus assembly protein ComGB	Machinery gene
DP111_RS00820 (DP111_00820)	comYC	127985..128266 (+)	282	WP_011921720.1	competence type IV pilus major pilin ComGC	Machinery gene
DP111_RS00825 (DP111_00825)	comGD	128247..128654 (+)	408	WP_024394702.1	competence type IV pilus minor pilin ComGD	-
DP111_RS00830 (DP111_00830)	comYE	128626..128919 (+)	294	WP_024394703.1	competence type IV pilus minor pilin ComGE	Machinery gene
DP111_RS00835 (DP111_00835)	comGF/cglF	128906..129340 (+)	435	WP_029750050.1	competence type IV pilus minor pilin ComGF	Machinery gene
DP111_RS00840 (DP111_00840)	comGG	129318..129728 (+)	411	WP_024394705.1	competence type IV pilus minor pilin ComGG	-
DP111_RS00845 (DP111_00845)	comYH	129785..130738 (+)	954	WP_024394706.1	class I SAM-dependent methyltransferase	Machinery gene
DP111_RS00850 (DP111_00850)	-	130788..131975 (+)	1188	WP_014637319.1	acetate kinase	-
DP111_RS00855 (DP111_00855)	-	132290..132841 (+)	552	WP_014636756.1	folate family ECF transporter S component	-
DP111_RS00860 (DP111_00860)	-	132895..134151 (+)	1257	WP_024394707.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16507.85 Da
• Isoelectric Point: 8.8193

>NTDB_id=299416 DP111_RS00835 WP_029750050.1 128906..129340(+) (comGF/cglF) [Streptococcus suis strain SH1510]
MLKSKIPAFTLLECLVALVILSGSLLVFEGLSKLLIQEAHYQRQSVQKEWLVFSSQLRSEWDRSELVKVENGKVYVDKGG
QSLAFGKSRSDDFRKTNDRGQGYQPMLYQVDSAAISQENQLVRIDFSFKNGEERTFIYAFKEKS

Nucleotide

• Length: 435 bp

>NTDB_id=299416 DP111_RS00835 WP_029750050.1 128906..129340(+) (comGF/cglF) [Streptococcus suis strain SH1510]
TTGTTAAAAAGTAAAATTCCCGCTTTTACTCTCCTGGAATGCTTGGTAGCCTTAGTCATCCTATCAGGAAGTCTTCTGGT
CTTTGAAGGCTTGTCAAAGTTGTTGATTCAAGAAGCACATTACCAACGTCAATCTGTCCAAAAGGAGTGGCTGGTATTTT
CTAGTCAGTTGCGGTCAGAGTGGGACCGGTCGGAATTGGTCAAGGTTGAAAATGGCAAGGTCTATGTTGATAAAGGTGGT
CAGTCGTTGGCCTTTGGTAAGTCACGATCGGATGATTTTCGGAAAACAAATGACAGGGGACAGGGCTACCAGCCCATGCT
CTATCAGGTGGACAGTGCAGCTATTTCCCAAGAAAACCAGCTGGTGCGTATCGACTTTAGCTTTAAAAACGGAGAGGAGC
GGACCTTTATCTATGCTTTTAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (36-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae TIGR4	56.738	97.917	0.556
comGF/cglF	Streptococcus pneumoniae Rx1	56.738	97.917	0.556
comGF/cglF	Streptococcus pneumoniae D39	56.738	97.917	0.556
comGF/cglF	Streptococcus pneumoniae R6	56.738	97.917	0.556
comGF/cglF	Streptococcus mitis NCTC 12261	57.463	93.056	0.535
comGF/cglF	Streptococcus mitis SK321	54.478	93.056	0.507
comYF	Streptococcus mutans UA140	50.694	100	0.507
comYF	Streptococcus mutans UA159	50	100	0.5
comGF	Lactococcus lactis subsp. cremoris KW2	46.099	97.917	0.451