Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | BCAN_RS05140 | Genome accession | NC_010103 |
| Coordinates | 1075029..1075535 (-) | Length | 168 a.a. |
| NCBI ID | WP_002967690.1 | Uniprot ID | A0A7L9MC56 |
| Organism | Brucella canis ATCC 23365 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1070029..1080535
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BCAN_RS05125 (BCAN_A1118) | - | 1072098..1072727 (+) | 630 | WP_004691788.1 | MarC family protein | - |
| BCAN_RS05130 (BCAN_A1119) | phnN | 1072818..1073396 (-) | 579 | WP_004685664.1 | phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN | - |
| BCAN_RS05135 (BCAN_A1120) | phnF | 1073583..1074344 (+) | 762 | WP_004689719.1 | phosphonate metabolism transcriptional regulator PhnF | - |
| BCAN_RS17710 | - | 1074487..1074873 (+) | 387 | Protein_1032 | hypothetical protein | - |
| BCAN_RS16365 | - | 1074925..1075125 (+) | 201 | WP_002971429.1 | hypothetical protein | - |
| BCAN_RS05140 (BCAN_A1122) | ssb | 1075029..1075535 (-) | 507 | WP_002967690.1 | single-stranded DNA-binding protein | Machinery gene |
| BCAN_RS16370 (BCAN_A1123) | - | 1076103..1076303 (+) | 201 | WP_002964232.1 | hypothetical protein | - |
| BCAN_RS05145 (BCAN_A1124) | uvrA | 1076434..1079358 (+) | 2925 | WP_004690871.1 | excinuclease ABC subunit UvrA | - |
| BCAN_RS05150 (BCAN_A1125) | - | 1079544..1079819 (-) | 276 | WP_002964234.1 | HU family DNA-binding protein | - |
Sequence
Protein
Download Length: 168 a.a. Molecular weight: 18371.15 Da Isoelectric Point: 5.3476
>NTDB_id=29608 BCAN_RS05140 WP_002967690.1 1075029..1075535(-) (ssb) [Brucella canis ATCC 23365]
MAGSVNKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGERKDRTEWHSVVIFNENLAKVAEQYLKKGAKVYI
EGALQTRKWQDQNGNDRYSTEIVLQKFRGELQMLDSRSEGGEGRSFGGGGNRNQMSDYSGGGGDFGSSGPSSGSSGGFSR
DLDDEIPF
MAGSVNKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGERKDRTEWHSVVIFNENLAKVAEQYLKKGAKVYI
EGALQTRKWQDQNGNDRYSTEIVLQKFRGELQMLDSRSEGGEGRSFGGGGNRNQMSDYSGGGGDFGSSGPSSGSSGGFSR
DLDDEIPF
Nucleotide
Download Length: 507 bp
>NTDB_id=29608 BCAN_RS05140 WP_002967690.1 1075029..1075535(-) (ssb) [Brucella canis ATCC 23365]
ATGGCTGGTAGCGTCAACAAGGTCATTCTGGTCGGCAATCTTGGTGCAGATCCTGAAATTCGCCGCCTGAATTCCGGCGA
TATGGTTGCCAACCTGCGCATTGCAACCTCGGAAAGCTGGCGTGACCGCCAGACCGGCGAACGCAAGGATCGCACCGAAT
GGCACAGCGTCGTCATCTTCAATGAAAATCTCGCCAAGGTTGCCGAACAATATCTGAAGAAGGGCGCCAAGGTTTATATC
GAAGGCGCGCTCCAGACCCGCAAGTGGCAGGATCAAAACGGCAATGACCGTTATTCAACGGAAATCGTGCTGCAAAAATT
CCGTGGAGAGCTTCAAATGCTCGACAGCCGCAGCGAAGGCGGCGAGGGCCGTTCCTTCGGCGGTGGTGGCAACCGCAACC
AGATGTCGGATTATTCCGGCGGCGGTGGAGATTTCGGCTCATCCGGCCCATCTTCGGGCAGCAGCGGCGGTTTCTCGCGC
GATCTGGACGATGAAATTCCGTTCTGA
ATGGCTGGTAGCGTCAACAAGGTCATTCTGGTCGGCAATCTTGGTGCAGATCCTGAAATTCGCCGCCTGAATTCCGGCGA
TATGGTTGCCAACCTGCGCATTGCAACCTCGGAAAGCTGGCGTGACCGCCAGACCGGCGAACGCAAGGATCGCACCGAAT
GGCACAGCGTCGTCATCTTCAATGAAAATCTCGCCAAGGTTGCCGAACAATATCTGAAGAAGGGCGCCAAGGTTTATATC
GAAGGCGCGCTCCAGACCCGCAAGTGGCAGGATCAAAACGGCAATGACCGTTATTCAACGGAAATCGTGCTGCAAAAATT
CCGTGGAGAGCTTCAAATGCTCGACAGCCGCAGCGAAGGCGGCGAGGGCCGTTCCTTCGGCGGTGGTGGCAACCGCAACC
AGATGTCGGATTATTCCGGCGGCGGTGGAGATTTCGGCTCATCCGGCCCATCTTCGGGCAGCAGCGGCGGTTTCTCGCGC
GATCTGGACGATGAAATTCCGTTCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
48.947 |
100 |
0.554 |
| ssb | Vibrio cholerae strain A1552 |
49.711 |
100 |
0.512 |
| ssb | Neisseria meningitidis MC58 |
38.547 |
100 |
0.411 |
| ssb | Neisseria gonorrhoeae MS11 |
37.778 |
100 |
0.405 |